Gene
RNA
| Item | Value |
|---|---|
| RNA id | LOC110536556 |
| length | 915 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 3 |
| gene id | LOC110536556 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 15283295 ~ 15284424 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0005581 | collagen trimer | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1080677 | lncRNA | upstream | 36420 | 15246427 ~ 15246875 (+) | True | G947772 |
| TU1080670 | lncRNA | upstream | 41853 | 15241222 ~ 15241442 (+) | True | G947765 |
| TU1080667 | lncRNA | upstream | 48535 | 15234283 ~ 15234760 (+) | True | G947762 |
| TU1080666 | lncRNA | upstream | 50357 | 15232736 ~ 15232938 (+) | True | G947761 |
| TU1080665 | lncRNA | upstream | 50970 | 15232010 ~ 15232325 (+) | True | G947760 |
| TU1080724 | lncRNA | downstream | 53080 | 15337504 ~ 15337795 (+) | True | G947810 |
| TU1080725 | lncRNA | downstream | 53500 | 15337924 ~ 15338191 (+) | True | G947811 |
| TU1080727 | lncRNA | downstream | 55243 | 15339667 ~ 15339910 (+) | True | G947813 |
| TU1080820 | lncRNA | downstream | 69269 | 15353693 ~ 15353931 (+) | False | LOC110536557 |
| TU1080821 | lncRNA | downstream | 69828 | 15354252 ~ 15355812 (+) | True | LOC110536557 |
| XM_021620273.2 | mRNA | upstream | 1082 | 15278474 ~ 15282213 (+) | False | tagln3b |
| XM_036934980.1 | mRNA | upstream | 1082 | 15279008 ~ 15282213 (+) | True | tagln3b |
| XM_021620272.2 | mRNA | upstream | 6194 | 15269612 ~ 15277101 (+) | True | abhd10b |
| XR_005034577.1 | mRNA | upstream | 266568 | 14997879 ~ 15016727 (+) | True | LOC118937318 |
| XM_021620268.2 | mRNA | upstream | 365132 | 14905428 ~ 14918163 (+) | False | LOC110535331 |
| XM_036934981.1 | mRNA | downstream | 618 | 15285042 ~ 15320246 (+) | False | spata13 |
| XM_036934982.1 | mRNA | downstream | 618 | 15285042 ~ 15320246 (+) | False | spata13 |
| XM_036934983.1 | mRNA | downstream | 618 | 15285042 ~ 15320246 (+) | False | spata13 |
| XM_036934984.1 | mRNA | downstream | 618 | 15285042 ~ 15320246 (+) | False | spata13 |
| XM_036934985.1 | mRNA | downstream | 36158 | 15320582 ~ 15337190 (+) | True | tmprss7 |
| TU1080168 | other | upstream | 396013 | 14886614 ~ 14887282 (+) | True | G947301 |
| TU1079869 | other | upstream | 613539 | 14665726 ~ 14669756 (+) | False | LOC110535322 |
| TU1079817 | other | upstream | 699246 | 14582543 ~ 14584049 (+) | True | G946999 |
| TU1079455 | other | upstream | 881651 | 14401254 ~ 14401644 (+) | True | G946692 |
| TU1079453 | other | upstream | 883022 | 14399862 ~ 14400273 (+) | True | G946690 |
| TU1080689 | other | downstream | 755 | 15285179 ~ 15299373 (+) | True | spata13 |
| TU1080897 | other | downstream | 153257 | 15437681 ~ 15439862 (+) | False | LOC110535338 |
| TU1080898 | other | downstream | 153257 | 15437681 ~ 15439862 (+) | True | LOC110535338 |
| TU1080953 | other | downstream | 303406 | 15587830 ~ 15589776 (+) | True | rnf6 |
| TU1080943 | other | downstream | 367550 | 15651974 ~ 15659462 (+) | False | atp8a2 |
