Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036935001.1 |
| length | 4255 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 37 |
| gene id | atp8a2 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 15594416 ~ 15660363 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
15,560,000
15,570,000
15,580,000
15,590,000
15,600,000
15,610,000
15,620,000
15,630,000
15,640,000
15,650,000
15,660,000
15,670,000
15,680,000
15,690,000
NC_048575.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1080990 | lncRNA | upstream | 55973 | 15538165 ~ 15538443 (+) | True | G948011 |
| TU1080981 | lncRNA | upstream | 64474 | 15526437 ~ 15529942 (+) | False | G948005 |
| TU1080980 | lncRNA | upstream | 65892 | 15526437 ~ 15528524 (+) | False | G948005 |
| TU1080938 | lncRNA | downstream | 74 | 15659011 ~ 15660363 (+) | False | atp8a2 |
| TU1080942 | lncRNA | downstream | 74 | 15659011 ~ 15660363 (+) | False | atp8a2 |
| TU1080944 | lncRNA | downstream | 74 | 15659011 ~ 15660363 (+) | False | atp8a2 |
| TU1080945 | lncRNA | downstream | 74 | 15659011 ~ 15660363 (+) | False | atp8a2 |
| TU1080946 | lncRNA | downstream | 74 | 15659011 ~ 15660363 (+) | False | atp8a2 |
| XM_036934994.1 | mRNA | upstream | 516 | 15587291 ~ 15593900 (+) | False | rnf6 |
| XM_021620299.2 | mRNA | downstream | 29323 | 15688260 ~ 15694754 (+) | False | spice1 |
| XM_021620297.2 | mRNA | downstream | 29324 | 15688261 ~ 15695114 (+) | False | spice1 |
| XM_021620298.2 | mRNA | downstream | 29324 | 15688261 ~ 15695114 (+) | False | spice1 |
| XR_002475244.2 | mRNA | downstream | 29324 | 15688261 ~ 15695114 (+) | True | spice1 |
| XM_036935014.1 | mRNA | downstream | 88213 | 15747150 ~ 15800515 (+) | False | boc |
| TU1080953 | other | upstream | 4640 | 15587830 ~ 15589776 (+) | True | rnf6 |
| TU1080897 | other | upstream | 154554 | 15437681 ~ 15439862 (+) | False | LOC110535338 |
| TU1080898 | other | upstream | 154554 | 15437681 ~ 15439862 (+) | True | LOC110535338 |
| TU1080689 | other | upstream | 295043 | 15285179 ~ 15299373 (+) | True | spata13 |
| TU1080168 | other | upstream | 707134 | 14886614 ~ 14887282 (+) | True | G947301 |
| TU1081090 | other | downstream | 88436 | 15747373 ~ 15793034 (+) | True | boc |
| TU1081573 | other | downstream | 395128 | 16054065 ~ 16054638 (+) | True | G948524 |
| TU1081554 | other | downstream | 414479 | 16073416 ~ 16083282 (+) | False | sh3kbp1 |
| TU1081677 | other | downstream | 550992 | 16209929 ~ 16210840 (+) | False | ccl20b |
| TU1081665 | other | downstream | 664413 | 16323350 ~ 16326407 (+) | True | G948587 |
