RNA id: XM_036935024.1


Basic Information

Item Value
RNA id XM_036935024.1
length 5895
RNA type mRNA
GC content 0.51
exon number 30
gene id map3k15
representative True

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 16098605 ~ 16205054 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

acacgtgtgtgcatTGGTtttgtgtgtgagcgtatgtgtgtgtgtgtgtgtctagtgccACTCCACTGCTCTTTACTCTGTTGATTCAGTTAATTAGTCTGGTAGAACATGACTGAGTCTCCATAGagcaatggacacacacacacacacggacacaggcTGCTGTTTTCTTGCTTGTTTAAACTGCTGTatttgctgtgtgtgtatgttttgtagACAAGTGTGTGTTACCATCTCTATCTCTTCAGGTAGTGTGCatgtgcatgcatttgtgtgtgtctttgcgcGTGTGAGTTGCTTCGACTAAAGACAGAGATCGTGTGCGACAGGTCCAGAATGTCCTCGGGGCAGTGGACATAACTCGAAATaacttgactgtgtgtgtgagtgttggctggctggctggctagctggggGTGTCAGATCAGAGGACAGACAGTCTTTTATATTTAGCTGCAGCGGCACCTCAGCCCTGCTAGAGAGCTCTACAACCCAACTGTCTATGTGTGCTGTTTAAGTACCTCTGGGAAGTATAAGCTGTTTTgaagagcgtgtgtgtgttgtagaaggACAGAGCCTGAGGAGATGCACACACCCCGTCCAGACCAGCGTGTGAGTATGTGTGGGAACAAGCGGTGCAGCGTCTGACAGAACCGGAGAGGAGAGGTCTGGATCGACAGATTCACATGCTCCACCGGGCACTAGGCAGCGGACAGCCGGTTTGCTGACTTTCTGATTGTTGACACATTTTCTCAGAGCCATCAtataactctctttctctctctctcgctcgctcactaCTCCCCCCCTCGTCTCTGTGTGATAGTGTTGAACTAGCCTGATCTGGTCTGGTTGGTAACACAGTAAGGAAATGATGTGTGAGGTTGTCAGTGGACAGACTCAGACCCACACGACTCCCCAGGCAACAGATGCACTGAGACACTAGCTCAGCTCCAATCCTCAGGAGGAGAGGAAAACCGAGGAAGAGCGAGACGAACTCCGCTTTCATCCCTGGGACCATGGACACGGCTGGTCAGAGTGCGCTGGCGAccgaggcagggggagagggtcgaggaggagggggggagagtcGTGAGGGAGTGTTTGTAGGGTCTGTGGACCGGGAGAATGTGTCCAGCCCAAGCCCCTCCACCAAGCAGCGCTCCCTGAGGGCAGTCTATGTGCTGAACGATGGGCTGAAGGCAGTGCTGGCGACCAGCCCCGAGTCGGGGGCACTCCAGTGTCTGCAGAGAGCCTGTGATGCAGAGAGCGCTCTGCTGACCACCGTCACCTTTGGACGACTGGACTTTGGAGAGACCTCGGTGCTGGACACCTTCTACGAtgcagacatAGCGGTAGTTGATATGAGTGATGTGTTCCGGCAGCCGTCGTTGTTTTACCATCTGGGTGTCAGAGAGAGCTTCGACATGGCCAACAATGTTATCCTGTACCATGACACTGACCCCGACACCGCTTTGTCACTGaagGACATGGTGGCACAGAAAAACACTGCGTCTAGAACACAGACATTAGGGTTCCCCTGGGTTCAGCTCCCTCCAGAGTACAGAGGCTCTGGATTACGCAACAAAGCGTCCAGTGGTAACTACTACTTCATCCCTTATGTGCTGACTCCTAACCATGAGTATATGTGTTGTGAGAGCGATGCCCAGAGGAGGGCCAGTGAATACATGCAGCCCAGCTGGGACAGCCTGCTGAGTCCTCTCTGTCTGCCACTCACCGACCGCTTCACCTCACTGCTCAAGGACATCCACGTCACttcctgtgcctCATTTAAGGACACTCTGCTGAATGACATCAGGAAGGCCCGTGATAAGTACCAGGGGGAGGAGCTAGCCAAGGAGCTGTCTCGTATCAAACTGCGCATCGACAACACAGAGGTCCTAACACAGGACATCGTCATGAACCTGCTGTTCTCATACAGAGACATACAGGACTATGATGCCATGGTGAAACTGGTCCAGACTCTGGAGATGCTGCCTACCTGTGACCTGGCCACACAGCCCATGATACAGTTCCACTACGCTTTCGCTCTCAACAGGAGGAACAGCCCGGGGGACAGAGAGCAGGCTCTAGGTGTGATGTTACAGGTGTTACGGTCATGTGACCACCCGGCTCCAGACATGTTCTGCCTGTGTGGACGGATCTACAAGGACATCTTTCTCGATTCTGACTGTAAAGACACCAAGAACAGAGACAACGCCATCCAGTggtatAGGAAAGGTTTTGAGCTCCAGCCAACTCTCTACTCTGGTATCAATCTGGCTATTCTGCTCATTGTTGCTGGACAACAGTTTGAGAGTTCCATCGAGCTGAGGAAGATAGgtGTAAGGTTAAACAGTCTCCTGGGTCGTAAGGGCTCATTAGAGAAGATGAATAACTACTGGGATGTCGGTCAGTTCTTCACCGTTAGCATGTTGGCTAACGACATCCCAAAAGCTACGCAGGCCGCAGAGAAACTCTTCAAACTCAAACCACCcatctggTACTTGCGATCTGTGGTTCAGAACCTGCAGTTGATCCAGAGATTTAAGAAGACAACAGTAGAACactctccccagagagagaggCTCAACTTCTGGATGGACATCATCGTAGAGGCCACTAGAGGAAAAAGCAACGGACTGCGCTTCccggtgttgaTCCTAGAGCCTACTAAGGTCTACCAGCCCTCATATGTTTCCATCAACAGCGAGGCGGAGGAGAAGAACGTCTCCATCTGGCACGTCTCCCCTGCTGAAACGAAAGGGATCCATGAGTGGAACTTCACTGCAACATCCATCAAAGGAATCAGtatCTCTAAGTTTGATGAGCGCTGTTGTTTCCTGTATGTTCACGACAACTCAGACGACTTCCAGATCTACTTCTCTACTGAAGACCAGTGTGGCCGGTTCTGTTCCATGGTGAAGGAGATGATTTCTGATGGAACAGGAAATGCAGTGGAgctggagggagatggagacggAGACACACTGGAGTACGAGTATGACATTAACGAGAAGGCGGACCGTGTGGTGCTGGGCCGGGGGACCTATGGAGTGGTGTACGCTGGGAGAGACATGAGCAACCAGGTCCGCATCGCCATTAaagagataccagagagagacagcaggtaCTCCCAACCCCTTCATGAGGAGATAGCCCTGCATAAGTACCTGAAGCACAGGAACATTGTTCAGTACCTGGGCTCAGTCTCAGAGGATGGATACATCAAGATCTTCATGGAGCAAGTCCCtggagGCAGCCTGTCAGCGTTGCTGCGGTCAAAGTGGGGTCCGTTGAAGGAGGCAACCATCATCTTCTACACACGACAGATCCTGGAGGGACTCCGCTATCTCCACGAGAACCAGATAGTACACCGAGACATCAAGggGGATAATGTATTAGTTAATACCTACAGTGGAGTTCTGAAGATATCAGACTTTGGGACGTCTAAAAGGCTTGCGGGGGTCAACCCCTGCACCGAGACCTTCACtgGCACCCTGCAGTACATGGCTCCAGAGATCATAGACAAGGGTCCTCGGGGTTACGGAGCTCCAGCTGACATCTGGTCTCTGGGCTGCACCATCATAGAGATGGCTACTGGGAAACCCCCCTTCCACGAGCTGGGAGAGCCACAGGCTGCTATGTTTAAGgtGGGGATGTTTAAGATCCACCCAGAGATCCCAGAGTCGTTGTCGTTGGAGGCCAAGTCGTTTATCCTGCGTTGTTTTGAGCCTGACCCTAATAAGAGGGCTACCGCCTCAGACCTGCTCAAAGATATCTTCGTACGACACAATGTCAAGGGAAAGAAGAGCAAAATCGCCTTCAAGCCATCAGTGTGGCAAGACTACATCCGCAGTGTTTCGCTGCCGGTGCAGTTACAGTGTGAGGCCACCGGGAGCAGCAGCAGCGAACCCGGCTCAGTGAGTCCAGACTGCGACTCCAAACAGGATGTCTTCTTTCAGAAGAACAAACGATCAGGGTCAGAGAACCTGCTCAAACCACCCAGCAACAACTACCTAAGTGTACCGGATGATGGGTCAGTGTCAGAGGACCGTAGCTCTCCTGCGTCTCTagaagacagagatggagggctctTCCTGCTGAAGAAGGACAGCGAGAGGAGAGCCATCCtctacaagGTCCTGAACGAGGACCAGGACAAAGTAATCTCCAACCTCCTGGAGAACCACATACAGggcAGTGAGGAGCTGCAGCTCTCTGTGGACCACATTAAACAGATCATCTGTATCCTGAGAGATTTCATCCACTCCCCGGAGCGACGCGTCATGGCAACAACCATCTCCAAACTCAAACTGGACCTAGACTTCGACTCCACATCCATCAACCAGATACAACTGGTTCTTTTTGGCTTCCAGGATtcagTGAACAAGGTCCTGAGGAACCATCATATTAAACCTCACTGGATGTTTGCTATGGACAACATCATCAGACGAGCAGTACAGGCTGCAGTCACCATCCTCATACCAGAGCTCCAGACCCACTTCGGCCCGGCCTCGGAGAGCGAGGGAccagataaggaggaggaggaagaggaggaggagacagagttTGGCCCTGTATTGGTCACGCCTCCAGACGACCATGCTGTGACCCCCGAACCCGTGGTGACCTCAGCAGTCAGCACGCTcagctccaccctctcctccccgcCTCCGCCTCTGCGCTCACAGCCTCTCGGAGCCCAGTTGGGCCGGCTCAAACAGGAGAccaaccgGTTGTTGGAGGAACTGctgcacagggagagagagtaccaGCAGGTCCTGAAGACAACACTACAGCAAAGACAACATGACCTAGAGCTGGTCAGGGTCAGATACAGacccccagacgttcctcctccctctatcttccAAGTCCCAGTTGACCACGAGCCTGATAAGCAGctcactgattggctgaaagaccAGAGTGCAGATGCAGACACCATAGACAAGGGGTGGGGTGCTGTGTCGTATATGGCGGGGTATCCAGaggcacagagagcgagagaggctgaCAAGGGATGACTCCAAAGATGACGGATGATGGGATACATGAACTACGACTGCCttaacactcacacacagagaaatagaatgaatagaacgggcgtccccattcaagtcaattatGGCATATTGGTTGGGCAGGCAGCCATTGCATGTGTACCCATAGGGGCAAAGCAGGAAGTGAAAGCTGGAAGTGTACCCATCAATCTGTGTTGTGATTTGTTGaatcaactcaactgacattacaaaaaaatacattccatgagccacatcagttagcaTCATTTGAAAGAACATTCTATATTACCATGGGAATTATTGCAACACAATACCAGGtagccattgcgagtgtacccattattaccagtcaaattgccagggttagaggttgcAAACCCATTCTATTCGTTCTATTTCtatgcatgcacacatgcacacacagaccaaactgttgtgtgtgtgtttgattgagtgtgtgattgagtgtgtgtgtgtgtgcgtgttatgtACACCACACGTGCTTCTTAGGTTTCGTCCCATGCTAAATTCTGCCTGCTCATTGGTCCTGTATTGCACCAGGAAGTTTGTGGCCCTAGCCAAGAGACGCAGTGGGCATTTAGttacacacacaaccagacaaccagtctgtaatgtagtgtttattttTTGGTCTCTCTAATTCTGTATAGTGACGTGTATAGTATAGAGGTCTATAGTGTAGAACTGTGTTTGTAGTTAGCACAGGTCTGTGGCTTTTCATGTTTTAGTCCAGCTGTGTTCATGTTTTAGATGTCTTCATGTGATTTCAATGTGTTactttaaaggtgcaatatgcacgATTTACAGCTGTTCCAAGGTCATTTCAATAAATGATATATACTCA

Function

GO: NA

KEGG:

id description
K13986 MAP3K15; mitogen-activated protein kinase kinase kinase 15

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1081552 lncRNA upstream 108 16090404 ~ 16098497 (+) True sh3kbp1
TU1081593 lncRNA upstream 9631 16088465 ~ 16088974 (+) True G948542
TU1081541 lncRNA upstream 93685 16004710 ~ 16004920 (+) True G948494
TU1081533 lncRNA upstream 112826 15984758 ~ 15985779 (+) True G948486
TU1081529 lncRNA upstream 117878 15980520 ~ 15980727 (+) True G948482
TU1081678 lncRNA downstream 5337 16210391 ~ 16210840 (+) True ccl20b
TU1081661 lncRNA downstream 61092 16266146 ~ 16278483 (+) True G948583
TU1081655 lncRNA downstream 93302 16298356 ~ 16298602 (+) True G948577
TU1081710 lncRNA downstream 93884 16298938 ~ 16299177 (+) True G948626
TU1081715 lncRNA downstream 94822 16299876 ~ 16300305 (+) True G948630
XM_021620321.2 mRNA upstream 106 16073327 ~ 16098499 (+) False sh3kbp1
XM_021620322.2 mRNA upstream 106 16073327 ~ 16098499 (+) False sh3kbp1
XM_021620323.2 mRNA upstream 106 16073327 ~ 16098499 (+) False sh3kbp1
XM_021620318.2 mRNA upstream 106 16073330 ~ 16098499 (+) False sh3kbp1
XM_021620324.2 mRNA upstream 1408 16073315 ~ 16097197 (+) False sh3kbp1
NM_001124254.1 mRNA downstream 4937 16209991 ~ 16211192 (+) False ccl20b
XM_036935025.1 mRNA downstream 36527 16241581 ~ 16253322 (+) False tfr1b
XR_005034583.1 mRNA downstream 36527 16241581 ~ 16253322 (+) True tfr1b
XM_036935026.1 mRNA downstream 48955 16254009 ~ 16274994 (+) False tnk2a
XM_036935027.1 mRNA downstream 48979 16254033 ~ 16274994 (+) False tnk2a
TU1081554 other upstream 15323 16073416 ~ 16083282 (+) False sh3kbp1
TU1081573 other upstream 43967 16054065 ~ 16054638 (+) True G948524
TU1081090 other upstream 305571 15747373 ~ 15793034 (+) True boc
TU1080943 other upstream 439143 15651974 ~ 15659462 (+) False atp8a2
TU1080953 other upstream 508829 15587830 ~ 15589776 (+) True rnf6
TU1081677 other downstream 4875 16209929 ~ 16210840 (+) False ccl20b
TU1081665 other downstream 118296 16323350 ~ 16326407 (+) True G948587
TU1081649 other downstream 128003 16333057 ~ 16335292 (+) True LOC110535372
TU1081652 other downstream 338761 16543815 ~ 16545289 (+) False LOC110535387
TU1081800 other downstream 349146 16554200 ~ 16601892 (+) True G948710

Expression Profile