Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005034788.1 |
| length | 832 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 3 |
| gene id | LOC118937438 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 16995961 ~ 16997111 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006412 | translation | biological_process |
| GO:0005840 | ribosome | cellular_component |
| GO:0016787 | hydrolase activity | molecular_function |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1082056 | lncRNA | upstream | 22911 | 16972551 ~ 16973050 (+) | True | G948953 |
| TU1081898 | lncRNA | upstream | 99440 | 16895532 ~ 16896521 (+) | True | G948798 |
| TU1082004 | lncRNA | upstream | 149229 | 16846454 ~ 16846732 (+) | True | G948904 |
| TU1081983 | lncRNA | upstream | 199275 | 16796442 ~ 16796686 (+) | True | G948883 |
| TU1081968 | lncRNA | upstream | 245497 | 16749615 ~ 16750464 (+) | True | G948868 |
| TU1081897 | lncRNA | downstream | 37050 | 17034161 ~ 17035973 (+) | True | G948797 |
| TU1081893 | lncRNA | downstream | 39560 | 17036671 ~ 17042940 (+) | True | G948793 |
| TU1082142 | lncRNA | downstream | 219530 | 17216641 ~ 17216871 (+) | True | G949033 |
| TU1082157 | lncRNA | downstream | 233025 | 17230136 ~ 17230431 (+) | True | G949042 |
| TU1082159 | lncRNA | downstream | 235690 | 17232801 ~ 17233502 (+) | True | G949044 |
| XM_021620381.2 | mRNA | upstream | 19430 | 16961687 ~ 16976531 (+) | True | LOC110535399 |
| XM_036935067.1 | mRNA | upstream | 38897 | 16902373 ~ 16957064 (+) | False | LOC110536565 |
| XM_036935074.1 | mRNA | downstream | 68773 | 17065884 ~ 17108912 (+) | False | pip4k2aa |
| XM_036935075.1 | mRNA | downstream | 68774 | 17065885 ~ 17108912 (+) | False | pip4k2aa |
| XM_036935076.1 | mRNA | downstream | 68789 | 17065900 ~ 17108912 (+) | True | pip4k2aa |
| XM_036935078.1 | mRNA | downstream | 131316 | 17128427 ~ 17211793 (+) | False | mllt10 |
| XM_036935077.1 | mRNA | downstream | 134285 | 17131396 ~ 17211793 (+) | False | mllt10 |
| TU1081800 | other | upstream | 394069 | 16554200 ~ 16601892 (+) | True | G948710 |
| TU1081652 | other | upstream | 450672 | 16543815 ~ 16545289 (+) | False | LOC110535387 |
| TU1081649 | other | upstream | 660669 | 16333057 ~ 16335292 (+) | True | LOC110535372 |
| TU1081665 | other | upstream | 669554 | 16323350 ~ 16326407 (+) | True | G948587 |
| TU1081677 | other | upstream | 785121 | 16209929 ~ 16210840 (+) | False | ccl20b |
| TU1085033 | other | downstream | 2129554 | 19126665 ~ 19127085 (+) | True | G951511 |
| TU1086071 | other | downstream | 2764154 | 19761265 ~ 19769353 (+) | False | phldb2b |
| TU1089657 | other | downstream | 5729442 | 22726553 ~ 22741247 (+) | True | tlcd4a |
| TU1090807 | other | downstream | 6668177 | 23665288 ~ 23665930 (+) | True | G956728 |
| TU1090885 | other | downstream | 6778661 | 23775772 ~ 23776845 (+) | True | G956797 |
