RNA id: XM_036935088.1


Basic Information

Item Value
RNA id XM_036935088.1
length 3896
RNA type mRNA
GC content 0.48
exon number 20
gene id ezh2
representative False

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 17356706 ~ 17369209 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

CAGTGGCCCGAGTGGGCGGCGAATGTTGACCATGGTGCTGACAGGGAAGCGGTCTGAGAAGGGACCAGTGTGTTGGAGGAGACGGGTGAAGTCTGAGTACATGAGGCTACGCCAACTCAAACGTTTCAGACGGGCTGATGAGGTCAAGAGTATGTTTAACTCTAACCGTCAGAGGATCCTGGAGCGGACAGACATCCTGAACGCTGAGTGGAAGACCAGAAGGATCCAGCCCGTTCACATCATGACATCTGTTAGCTCCTTACGAGGGACCAGAGAGTGCACAGTGGACAGTGGTTTCTCTGAGTTCTCCAAACAGGTGATACCTCTGAAGACGCTCAACGCTGTAGCCTCTGTCCCTGTCATGTACTCCTGGTCCCCGCTACAGCAGAACTTCATGGTAGAAGACGAAACGGTTCTCCACAACATCCCTTACATGGGAGACGAGATTCTGGACCAAGACGGAACCTTCATAGAAGAACTCATCAAGAACTACGATGGCAAAGTTCACGGAGACAGGGAGTGCGGCTTCATCAACGATGAGATCTTTGTGGAGCTGGTGGGTGCCCTGACCCAGTACAGTGACAacgatgatgaggatgatgatgaagaagagCAGGAGTTTAAGCTTGAGAAGATGGAGCTCTGTGAGGCGAAGGACCACCTGGCCGAGGACCCCCGAAAGGAACCCCTGATCAACACTGACAGCCAAGGCAGCAGTGACAGCTCTAAGAAGTTTCCGTCTGATAAGATCTTTGAAGCCATCTCCTCAATGTTCCCTGATAAGGGCTCAACAGAGGAACTTCGAGAAAAGTACAAGGAGCTGACAGAGCCCCAGTTGCCTGGTGCGTTGCCTCCAGAGTGTACTCCTAACATGGACGGTCCCAACGCTCGCTCCGTTCAGAGGGAACAGAGTCTACACTCCTTCCACACACTCTTCTGCCGACGCTGCTTCAAATACGACTGCTTCCTGCACCGTGAGTCCTTCCATGCGACTCCTAACACCTATAAGCGTAAGAACATGGAGAATCTGGTAGACAGTAAACCCTGTGGTGACGAGTGCTACATGTACCTGGTGAAGGATGGATTGGTGAGGGAGTATCCTGACGGCATGGCAACCGAGAGGTCCAAGACCCCTTCCAAACGCCCAGTGAGCCGTCGCCGGGGACGACCCATCGGCAACAGCCGGCCTAGTACACCAACAGTCTCCACCGACACCAAAGACACGGACAGCGAGCAGGAGGGGAAAGACGACGAcgataatgataatgatgatgatgatgatgatgatgatgatgacaagaAGGACGAGACCACCAGCAGTTCAGAGGGTAACTCACGGTGCCAGACTCCAGTGAAGTTGAAGCTGACGTGTGACCCTCAGGTTGTTGATTGGAGCGGAGCCGAGGCTTCACTCTTTAGGGTTCTCATCggaacctactacgacaactactGCGCTATAGCACGGCTCATAGGAACCAAGACCTGCAGACAGGTATATGAGTTCAGAGTGAAGGAGTCTAGTATCATCGCTCGCGCTCCGGCCGAGGACGAAGACACGCCCCCTCGCAAGAAGAAGAGGAAACACAGGTTGTGGGCCACTCACTGCAGGAAGATCCAACTGAAGAAAGATGGTTCGTCCAACCACGTGTATAACTACCAGCCATGTGACCACCCCCGCCAGCCCTGTGACTCCTCCTGTCCCTGTGTCACTGCTCAGAACTTCTGTGAGAAGTTCTGCCAGTGCAGCTCAGAGTGTCAGAACCGTTTCCCAGGCTGCAGGTGTAAGGCCCAGTGTAACACTAAACAGTGTCCGTGTTACCTGGCGGTCAGAGAGTGTGACCCTGACCTGTGTCTGACCTGCGGAGCCGCTGAACACTGGGACAGCAAGAACGTCTCCTGTAAAAACTGCTCCATACAGAGGGGAGCCaagaagcaCCTGCTCCTAGCTCCGTCTGATGTAGCAGGCTGGGGCATCTTCATCAAAGAGCCAGTTCAGAAGAATGAGTTCATCTCTGAGTACTGTGGGGAGATAATCTCCCAAGATGAGGCGGATCGCAGAGGGAAGGTCTACGACAAATACATGTGTAGCttcctcttcaacctcaacaacgatTTTGTAGTGGATGCTACTAGGAAAGGAAACAAGATTCGTTTCGCCAACCATTCCGTCCACCCCAACTGCTATGCAAAAGTGATGATGGTGAATGGGGACCACAGGATAGGGATCTTTGCTAAGAGAACCATCCAGACTGGAGAAGAGCTCTTCTTTGACTACCGGTACAGTCAAGCAGATGCTCTGAAGTACGTCGGCATCGAGCGGGAATCGGAGATGCCATGATCCCCTCTTCTACCTCTAGATCAAAGGccttacacacgcacgcacgctctTCTCTTCAGGAAACGCAAACGACTCATTGTCGGAATCCTGGGGTGCTTCAAGAATTCTGGGAAGTTTAGACCTTTTTTTTCCCCACTTTGAATAGTTTTTCTACCAACAAATCTTCCTGTTCCGAGTTATGTAGGACTCATTGCTATGGTCACTAGAACGGTCTTTCCTCCATTTACAGCTAACTAACACATAAACAGGTTTTAATAAATCCACTGCAGGGATCTCTTTAGCTCTGTTACGCTTTTTATACTTGATCCAAATCCATGGACACATTGACTCAATCATAACAAGTGGTTGTTGAACATTTTACTTAGCCCCTGACCACCAGCTAGACTAAATGCAGGTTAAAAACATCTGACTGACTTTTCCCCCTCCACTAGCCAGTGTCCAAACCCCTTAGTCTCAGACCCACTCTTGAACGCCCGAACATTGTTTTGAGACTAGCCTGATATCTGAGGTGACAGTGTACGATGCATGTTGACCAGCAGCActacctgtttttttttctttcctcTGACTTCTGGTTTATTCCTAAAACTATATTGTCTTTAATTTCTTCAAGTTTTGAACATTTGATGACCATTGACCACCTGAGGCATGCTTTGATACAATCTCTATTCTAGATGGTGCTAACTAAGACGGTGTGATGTTTTGTAAATGCCCCCAGGTATCCACTTCTGCTGTGCCTTGAATCTCGTCGTTAGAACACTGAATAGTCACTTGATTAGACCCCTTAAGTGTTGATTTATTGATAAAGATGTATCCTCAATCTGGTTAATGCATGATGATGAAAGCTTCCATGTTTGTAGTCCCGGGAAGACCTCACTGCTACTATAATCTAGTGATGCCTGGTGCTTGTGAATACTGCAGACTTgaaccaatacaaccagccttgAATAATGTTAAGTAATGTTCACGTCTTCACCTGCAGTGGGACGAACTGCTCTGATTTATCTCCTGTTTTTACAACTAACTTTGTCAACTTTTACCAGCAACTGAAAGAGGGCTCTGTAAAGACCTACAGACAGATCTAGATGACTGACGGTTGTGTTTAGATGGAAGTCAGGAGCCGATCTCCTTTAAGTAGTTTGTTGCTAATGTTAGTACAGGGTTGGGGAACTCTGGTTCTTGGGAGATCCATTGATTCAATGTCACAGCTTacaccaggtctgactggaaaaCCAGCAGATACAGCAGCTCGAGGACAAGTATCTCACCCATCTGTTTAGGATGTATACTTCCTGAGTTGTAGAGCCAGCTGGCGTCCAGTGGGATTGGACATTACAGAATGTTCATAGAAATATAGGCCTACTACATAGAACAGTGGTGCTTCTGTCATGGAATAGGGAAACCGCTCTATACAAATTATATATTGACTGTTGTGTAACGTTTCCTCCAGTTGTCTAGCCGGGACCACTACTGTCTGATTTCCAAGGTGCTGATTTTTACTGTCTTTACAGGGAGTATTGTTCAAAGTGATCCAGAATAAAATGAGAAAATGAAGGTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1082232 lncRNA upstream 1030 17356018 ~ 17356404 (+) True G949103
TU1082212 lncRNA upstream 29668 17327472 ~ 17327766 (+) True LOC110536567
TU1082203 lncRNA upstream 44161 17313051 ~ 17313273 (+) True G949087
TU1082196 lncRNA upstream 54651 17302337 ~ 17302783 (+) False LOC110536567
TU1082150 lncRNA upstream 97417 17258068 ~ 17260017 (+) True bmi1a
TU1082240 lncRNA downstream 17926 17387135 ~ 17387367 (+) True G949111
TU1082250 lncRNA downstream 34143 17403352 ~ 17403588 (+) True G949120
TU1082268 lncRNA downstream 59281 17428490 ~ 17459732 (+) True G949136
TU1082315 lncRNA downstream 144612 17513821 ~ 17520003 (+) True G949183
TU1082322 lncRNA downstream 147706 17516915 ~ 17518259 (+) True G949186
XM_021620393.2 mRNA upstream 4993 17342791 ~ 17352441 (+) True LOC110535409
XM_036936648.1 mRNA upstream 14803 17289622 ~ 17342631 (+) False LOC110536567
XM_036935085.1 mRNA upstream 71865 17281407 ~ 17285569 (+) True spag6
XM_021620390.2 mRNA upstream 86265 17261838 ~ 17271169 (+) False bmi1a
XR_005034593.1 mRNA downstream 16796 17386005 ~ 17391059 (+) True LOC118937326
XM_036935093.1 mRNA downstream 75059 17444268 ~ 17446180 (+) False LOC110535414
XM_021620400.2 mRNA downstream 75059 17444268 ~ 17446653 (+) False LOC110535414
XM_036935095.1 mRNA downstream 75059 17444268 ~ 17459118 (+) False LOC110535414
XM_036935094.1 mRNA downstream 75059 17444268 ~ 17464796 (+) False LOC110535414
TU1081800 other upstream 755542 16554200 ~ 16601892 (+) True G948710
TU1081652 other upstream 812145 16543815 ~ 16545289 (+) False LOC110535387
TU1081649 other upstream 1022142 16333057 ~ 16335292 (+) True LOC110535372
TU1081665 other upstream 1031027 16323350 ~ 16326407 (+) True G948587
TU1081677 other upstream 1146594 16209929 ~ 16210840 (+) False ccl20b
TU1085033 other downstream 1757456 19126665 ~ 19127085 (+) True G951511
TU1086071 other downstream 2392056 19761265 ~ 19769353 (+) False phldb2b
TU1089657 other downstream 5357344 22726553 ~ 22741247 (+) True tlcd4a
TU1090807 other downstream 6296079 23665288 ~ 23665930 (+) True G956728
TU1090885 other downstream 6406563 23775772 ~ 23776845 (+) True G956797

Expression Profile