Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1085613 |
| length | 679 |
| lncRNA type | sense_over |
| GC content | 0.41 |
| exon number | 2 |
| gene id | LOC110535436 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 19298579 ~ 19310732 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1085151 | lncRNA | upstream | 9879 | 19297355 ~ 19297559 (+) | True | G951627 |
| TU1085148 | lncRNA | upstream | 12651 | 19294394 ~ 19294787 (+) | True | G951624 |
| TU1085147 | lncRNA | upstream | 14712 | 19292516 ~ 19292726 (+) | True | G951623 |
| TU1085145 | lncRNA | upstream | 16753 | 19290464 ~ 19290685 (+) | True | G951621 |
| TU1085144 | lncRNA | upstream | 18178 | 19288856 ~ 19289260 (+) | True | G951620 |
| TU1085623 | lncRNA | downstream | 7308 | 19315600 ~ 19315953 (+) | True | G952064 |
| TU1085633 | lncRNA | downstream | 21721 | 19330013 ~ 19335646 (+) | False | LOC110535438 |
| TU1085634 | lncRNA | downstream | 21721 | 19330013 ~ 19335646 (+) | True | LOC110535438 |
| TU1085660 | lncRNA | downstream | 76252 | 19384544 ~ 19385929 (+) | True | LOC110535439 |
| TU1085770 | lncRNA | downstream | 291621 | 19599913 ~ 19600359 (+) | True | G952201 |
| XM_036935118.1 | mRNA | upstream | 462547 | 18822334 ~ 18844891 (+) | True | ankrd33ba |
| XM_021620415.2 | mRNA | upstream | 504567 | 18790180 ~ 18802871 (+) | False | LOC110535429 |
| XR_002475252.2 | mRNA | downstream | 21689 | 19329981 ~ 19335648 (+) | False | LOC110535438 |
| NM_001160571.1 | mRNA | downstream | 33689 | 19341981 ~ 19345685 (+) | True | ssm4 |
| XM_036935124.1 | mRNA | downstream | 68843 | 19377135 ~ 19385929 (+) | False | LOC110535439 |
| XM_036935125.1 | mRNA | downstream | 68843 | 19377135 ~ 19385929 (+) | False | LOC110535439 |
| XM_036935126.1 | mRNA | downstream | 68843 | 19377135 ~ 19385929 (+) | False | LOC110535439 |
| TU1085033 | other | upstream | 180353 | 19126665 ~ 19127085 (+) | True | G951511 |
| TU1081800 | other | upstream | 2705546 | 16554200 ~ 16601892 (+) | True | G948710 |
| TU1081652 | other | upstream | 2762149 | 16543815 ~ 16545289 (+) | False | LOC110535387 |
| TU1081649 | other | upstream | 2972146 | 16333057 ~ 16335292 (+) | True | LOC110535372 |
| TU1081665 | other | upstream | 2981031 | 16323350 ~ 16326407 (+) | True | G948587 |
| TU1086071 | other | downstream | 452973 | 19761265 ~ 19769353 (+) | False | phldb2b |
| TU1089657 | other | downstream | 3418261 | 22726553 ~ 22741247 (+) | True | tlcd4a |
| TU1090807 | other | downstream | 4356996 | 23665288 ~ 23665930 (+) | True | G956728 |
| TU1090885 | other | downstream | 4467480 | 23775772 ~ 23776845 (+) | True | G956797 |
| TU1092128 | other | downstream | 5292179 | 24600471 ~ 24601653 (+) | True | G957942 |
