Gene
RNA
| Item | Value |
|---|---|
| RNA id | NM_001160571.1 |
| length | 977 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 5 |
| gene id | ssm4 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 19341981 ~ 19345685 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0008270 | zinc ion binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1085633 | lncRNA | upstream | 6335 | 19330013 ~ 19335646 (+) | False | LOC110535438 |
| TU1085634 | lncRNA | upstream | 6335 | 19330013 ~ 19335646 (+) | True | LOC110535438 |
| TU1085623 | lncRNA | upstream | 26028 | 19315600 ~ 19315953 (+) | True | G952064 |
| TU1085613 | lncRNA | upstream | 33689 | 19307438 ~ 19308292 (+) | True | LOC110535436 |
| TU1085151 | lncRNA | upstream | 44422 | 19297355 ~ 19297559 (+) | True | G951627 |
| TU1085660 | lncRNA | downstream | 38859 | 19384544 ~ 19385929 (+) | True | LOC110535439 |
| TU1085770 | lncRNA | downstream | 254228 | 19599913 ~ 19600359 (+) | True | G952201 |
| TU1085777 | lncRNA | downstream | 266106 | 19611791 ~ 19613762 (+) | True | G952208 |
| TU1085801 | lncRNA | downstream | 294956 | 19640641 ~ 19641471 (+) | True | G952229 |
| TU1086054 | lncRNA | downstream | 338097 | 19683782 ~ 19684639 (+) | True | chodl |
| XR_002475252.2 | mRNA | upstream | 6333 | 19329981 ~ 19335648 (+) | False | LOC110535438 |
| XM_021620425.2 | mRNA | upstream | 31249 | 19298579 ~ 19310732 (+) | False | LOC110535436 |
| XM_036935118.1 | mRNA | upstream | 497090 | 18822334 ~ 18844891 (+) | True | ankrd33ba |
| XM_021620416.2 | mRNA | upstream | 539110 | 18790184 ~ 18802871 (+) | False | LOC110535429 |
| XM_036935124.1 | mRNA | downstream | 31450 | 19377135 ~ 19385929 (+) | False | LOC110535439 |
| XM_036935125.1 | mRNA | downstream | 31450 | 19377135 ~ 19385929 (+) | False | LOC110535439 |
| XM_036935126.1 | mRNA | downstream | 31450 | 19377135 ~ 19385929 (+) | False | LOC110535439 |
| XM_021620431.2 | mRNA | downstream | 55837 | 19401522 ~ 19414736 (+) | True | LOC110535440 |
| XM_021620433.2 | mRNA | downstream | 69437 | 19415122 ~ 19426756 (+) | True | LOC110535441 |
| TU1085033 | other | upstream | 214896 | 19126665 ~ 19127085 (+) | True | G951511 |
| TU1081800 | other | upstream | 2740089 | 16554200 ~ 16601892 (+) | True | G948710 |
| TU1081652 | other | upstream | 2796692 | 16543815 ~ 16545289 (+) | False | LOC110535387 |
| TU1081649 | other | upstream | 3006689 | 16333057 ~ 16335292 (+) | True | LOC110535372 |
| TU1081665 | other | upstream | 3015574 | 16323350 ~ 16326407 (+) | True | G948587 |
| TU1086071 | other | downstream | 415580 | 19761265 ~ 19769353 (+) | False | phldb2b |
| TU1089657 | other | downstream | 3380868 | 22726553 ~ 22741247 (+) | True | tlcd4a |
| TU1090807 | other | downstream | 4319603 | 23665288 ~ 23665930 (+) | True | G956728 |
| TU1090885 | other | downstream | 4430087 | 23775772 ~ 23776845 (+) | True | G956797 |
| TU1092128 | other | downstream | 5254786 | 24600471 ~ 24601653 (+) | True | G957942 |
