Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1086054 |
| length | 858 |
| lncRNA type | read_through |
| GC content | 0.37 |
| exon number | 1 |
| gene id | chodl |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 19672943 ~ 19684640 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0007409 | axonogenesis | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1085801 | lncRNA | upstream | 42311 | 19640641 ~ 19641471 (+) | True | G952229 |
| TU1085777 | lncRNA | upstream | 70020 | 19611791 ~ 19613762 (+) | True | G952208 |
| TU1085770 | lncRNA | upstream | 83423 | 19599913 ~ 19600359 (+) | True | G952201 |
| TU1085660 | lncRNA | upstream | 297853 | 19384544 ~ 19385929 (+) | True | LOC110535439 |
| TU1085633 | lncRNA | upstream | 348136 | 19330013 ~ 19335646 (+) | False | LOC110535438 |
| TU1086102 | lncRNA | downstream | 43844 | 19728483 ~ 19730374 (+) | True | G952509 |
| TU1086070 | lncRNA | downstream | 97902 | 19782541 ~ 19799150 (+) | True | phldb2b |
| TU1086134 | lncRNA | downstream | 147287 | 19831926 ~ 19832237 (+) | True | G952541 |
| TU1086157 | lncRNA | downstream | 174188 | 19858827 ~ 19859054 (+) | True | G952563 |
| TU1086158 | lncRNA | downstream | 176771 | 19861410 ~ 19861642 (+) | True | G952564 |
| trnac-gca-2 | mRNA | upstream | 54371 | 19629340 ~ 19629411 (+) | True | trnac-gca-2 |
| XM_036936650.1 | mRNA | upstream | 72729 | 19598451 ~ 19611053 (+) | True | hgd |
| XM_021620436.2 | mRNA | upstream | 122396 | 19466942 ~ 19561386 (+) | True | pola1 |
| XM_021620433.2 | mRNA | upstream | 257026 | 19415122 ~ 19426756 (+) | True | LOC110535441 |
| XM_021620431.2 | mRNA | upstream | 269046 | 19401522 ~ 19414736 (+) | True | LOC110535440 |
| XM_021622342.2 | mRNA | downstream | 40630 | 19725269 ~ 19734299 (+) | True | plcxd2 |
| XM_021620444.2 | mRNA | downstream | 55926 | 19740565 ~ 19786240 (+) | False | phldb2b |
| XM_021620445.2 | mRNA | downstream | 55927 | 19740566 ~ 19786240 (+) | False | phldb2b |
| XM_021620446.2 | mRNA | downstream | 55927 | 19740566 ~ 19786240 (+) | False | phldb2b |
| XM_021620448.2 | mRNA | downstream | 76374 | 19761013 ~ 19786240 (+) | False | phldb2b |
| TU1085033 | other | upstream | 556697 | 19126665 ~ 19127085 (+) | True | G951511 |
| TU1081800 | other | upstream | 3081890 | 16554200 ~ 16601892 (+) | True | G948710 |
| TU1081652 | other | upstream | 3138493 | 16543815 ~ 16545289 (+) | False | LOC110535387 |
| TU1081649 | other | upstream | 3348490 | 16333057 ~ 16335292 (+) | True | LOC110535372 |
| TU1081665 | other | upstream | 3357375 | 16323350 ~ 16326407 (+) | True | G948587 |
| TU1086071 | other | downstream | 76626 | 19761265 ~ 19769353 (+) | False | phldb2b |
| TU1089657 | other | downstream | 3041914 | 22726553 ~ 22741247 (+) | True | tlcd4a |
| TU1090807 | other | downstream | 3980649 | 23665288 ~ 23665930 (+) | True | G956728 |
| TU1090885 | other | downstream | 4091133 | 23775772 ~ 23776845 (+) | True | G956797 |
| TU1092128 | other | downstream | 4915832 | 24600471 ~ 24601653 (+) | True | G957942 |
