Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1104460 |
| length | 843 |
| lncRNA type | sense_over |
| GC content | 0.35 |
| exon number | 4 |
| gene id | LOC110535596 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 33644833 ~ 33690571 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1104421 | lncRNA | upstream | 25361 | 33605061 ~ 33619499 (+) | True | G969457 |
| TU1104417 | lncRNA | upstream | 43962 | 33600661 ~ 33600898 (+) | True | G969454 |
| TU1104415 | lncRNA | upstream | 45557 | 33599103 ~ 33599303 (+) | True | G969452 |
| TU1104412 | lncRNA | upstream | 47949 | 33596696 ~ 33596911 (+) | True | G969449 |
| TU1104404 | lncRNA | upstream | 50055 | 33594547 ~ 33594805 (+) | True | G969441 |
| TU1104732 | lncRNA | downstream | 123467 | 33785344 ~ 33785953 (+) | True | G969746 |
| TU1104734 | lncRNA | downstream | 125749 | 33787626 ~ 33787848 (+) | True | G969748 |
| TU1104742 | lncRNA | downstream | 138632 | 33800509 ~ 33800766 (+) | True | G969756 |
| TU1104743 | lncRNA | downstream | 138949 | 33800826 ~ 33801054 (+) | True | G969757 |
| TU1104745 | lncRNA | downstream | 140736 | 33802613 ~ 33802829 (+) | True | G969759 |
| XM_021620681.2 | mRNA | upstream | 62787 | 33573702 ~ 33582073 (+) | True | shh |
| XM_036935321.1 | mRNA | upstream | 170970 | 33411706 ~ 33473890 (+) | False | LOC110535592 |
| XM_036935330.1 | mRNA | downstream | 246839 | 33908716 ~ 34150393 (+) | False | LOC110535601 |
| XM_036935328.1 | mRNA | downstream | 246839 | 33908716 ~ 34154878 (+) | False | LOC110535601 |
| XM_036935331.1 | mRNA | downstream | 246839 | 33908716 ~ 34154878 (+) | False | LOC110535601 |
| XM_036935329.1 | mRNA | downstream | 331447 | 33993324 ~ 34154878 (+) | False | LOC110535601 |
| XM_021620694.2 | mRNA | downstream | 513625 | 34175502 ~ 34177730 (+) | True | LOC110535603 |
| TU1104419 | other | upstream | 40050 | 33604513 ~ 33604810 (+) | True | G969456 |
| TU1104418 | other | upstream | 41186 | 33603047 ~ 33603674 (+) | True | G969455 |
| TU1103419 | other | upstream | 170993 | 33458361 ~ 33473867 (+) | False | LOC110535592 |
| TU1103424 | other | upstream | 170993 | 33458539 ~ 33473867 (+) | True | LOC110535592 |
| TU1103506 | other | upstream | 259333 | 33384043 ~ 33385527 (+) | True | LOC110536614 |
| TU1104738 | other | downstream | 132498 | 33794375 ~ 33795061 (+) | True | G969752 |
| TU1105066 | other | downstream | 501939 | 34163816 ~ 34170987 (+) | True | G970054 |
| TU1105305 | other | downstream | 517826 | 34179703 ~ 34180048 (+) | True | G970283 |
| TU1105524 | other | downstream | 855949 | 34517826 ~ 34522340 (+) | True | G970489 |
| TU1107936 | other | downstream | 2588096 | 36249973 ~ 36250586 (+) | True | G972725 |
