Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00003850 |
| length | 827 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 7 |
| gene id | XLOC_001969 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 13209580 ~ 13236012 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0042981 | regulation of apoptotic process | biological_process |
| GO:0007165 | signal transduction | biological_process |
| GO:0005575 | cellular_component | cellular_component |
| id | description |
|---|---|
| ko04390 | Hippo signaling pathway |
| ko04392 | Hippo signaling pathway - multiple species |
| id | description |
|---|---|
| ZDB-GENE-030616-513 | Predicted to be involved in signal transduction. Predicted to act upstream of or within regulation of apoptotic process. Orthologous to human RASSF6 (Ras association domain family member 6). |
| ensembl_id | ENSDART00000136932 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00005692 | lncRNA | upstream | 1280558 | 11928089 ~ 11929132 (+) | False | XLOC_001965 |
| TCONS_00005691 | lncRNA | upstream | 1280558 | 11928089 ~ 11929132 (+) | True | XLOC_001965 |
| TCONS_00005690 | lncRNA | upstream | 1281704 | 11926073 ~ 11927986 (+) | False | XLOC_001964 |
| TCONS_00005689 | lncRNA | upstream | 1281704 | 11926073 ~ 11927986 (+) | True | XLOC_001964 |
| TCONS_00005836 | lncRNA | upstream | 1543727 | 11652749 ~ 11665963 (+) | True | XLOC_001961 |
| TCONS_00005837 | lncRNA | downstream | 75859 | 13298724 ~ 13304277 (+) | False | XLOC_001971 |
| TCONS_00005838 | lncRNA | downstream | 75861 | 13298726 ~ 13304277 (+) | True | XLOC_001971 |
| TCONS_00005839 | lncRNA | downstream | 1801916 | 15024781 ~ 15031440 (+) | False | XLOC_001979 |
| TCONS_00005840 | lncRNA | downstream | 1802127 | 15024992 ~ 15031440 (+) | False | XLOC_001979 |
| TCONS_00005841 | lncRNA | downstream | 1802164 | 15025029 ~ 15031440 (+) | True | XLOC_001979 |
| TCONS_00003848 | mRNA | upstream | 145580 | 13000704 ~ 13064110 (+) | True | XLOC_001968 |
| TCONS_00003846 | mRNA | upstream | 145947 | 13000370 ~ 13063743 (+) | False | XLOC_001968 |
| TCONS_00003847 | mRNA | upstream | 171148 | 13000669 ~ 13038542 (+) | False | XLOC_001968 |
| TCONS_00003845 | mRNA | upstream | 479239 | 12517059 ~ 12730451 (+) | True | XLOC_001967 |
| TCONS_00003842 | mRNA | upstream | 1421125 | 11767791 ~ 11788565 (+) | True | XLOC_001962 |
| TCONS_00003851 | mRNA | downstream | 56214 | 13279079 ~ 13287169 (+) | False | XLOC_001970 |
| TCONS_00003852 | mRNA | downstream | 60703 | 13283568 ~ 13286568 (+) | True | XLOC_001970 |
| TCONS_00003855 | mRNA | downstream | 987802 | 14210667 ~ 14212801 (+) | True | XLOC_001974 |
| TCONS_00003856 | mRNA | downstream | 1265760 | 14488625 ~ 14494239 (+) | True | XLOC_001975 |
| TCONS_00003857 | mRNA | downstream | 1276336 | 14499201 ~ 14521190 (+) | True | XLOC_001976 |
| TCONS_00003844 | other | upstream | 876321 | 12333253 ~ 12333369 (+) | True | XLOC_001966 |
| TCONS_00003843 | other | upstream | 1435171 | 11774405 ~ 11774519 (+) | True | XLOC_001963 |
| TCONS_00003841 | other | upstream | 1710881 | 11498693 ~ 11498809 (+) | True | XLOC_001959 |
| TCONS_00003830 | other | upstream | 2093720 | 11115854 ~ 11115970 (+) | True | XLOC_001954 |
| TCONS_00003827 | other | upstream | 2222388 | 10972810 ~ 10987302 (+) | False | XLOC_001952 |
| TCONS_00003853 | other | downstream | 633927 | 13856792 ~ 13894856 (+) | True | XLOC_001972 |
| TCONS_00003854 | other | downstream | 707983 | 13930848 ~ 13931718 (+) | True | XLOC_001973 |
| TCONS_00003873 | other | downstream | 2032317 | 15255182 ~ 15287900 (+) | False | XLOC_001989 |
| TCONS_00003878 | other | downstream | 2075925 | 15298790 ~ 15304367 (+) | True | XLOC_001989 |
| TCONS_00003893 | other | downstream | 2380219 | 15603084 ~ 15605143 (+) | False | XLOC_001994 |
