RNA id: XM_021621608.2


Basic Information

Item Value
RNA id XM_021621608.2
length 1881
RNA type mRNA
GC content 0.40
exon number 6
gene id mob1a
representative True

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 58867994 ~ 58881986 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

TAAAAACCTAACAAATTTCAACTTAAATTGTGTAACTTCAGAGTTTGAACGTCCCAAGAAACCAGCATTTTAAGGACCGTATAAATACTGCTGAACCATCCATATTACAACAATTACTGAAGTCATTTCCATGAGAATCCAAATGAGGGCGACAAACGTACATGTCGGCAAAATGTTGCGCTAACTATCTACGTCAAAATATTATTTCTTCAGGGTACGATTACACTGACAAGTGAGAGAAGAGTTAGAAAGTTCGGAGACTTTTCACCGGGGAAGCTAGAAAGGCTGTATATTCACCAAACAACCAGTGAAACGTTCGATACGACAGTTCTTTTGAGCTTCGATATTCTTTGGTCTGCATTTGTCTTCGTTTTACGACCGAAACTAAGTTAACGATGAGCTTCCTATTTGGCAGTCGCTCGTCTAAGACCTTCAAGCCGAAGAAGAACATCCCAGAGGGCTCCCACCAATACGAGCTGTTGAAGCATGCAGAGGCAACGCTGGGGAGTGGGAACCTGAGGCAGGCTGTCATGCTGCCAGAGGGGGAAGATCTCAATGAGTGGATTGCTGTTAACACTGTGGACTTCTTCAATCAGATCAACATGCTCTACGGCACCATTACTGAGTTCTGCACTGAGACCAGCTGTTCTGTGATGTCTGCAGGGCCCAGGTATGAATACCACTGGGCGGATGGCACCAACATCAAAAAACCCATCAAGTGCTCTGCTCCCAAGTACATAGACTACCTGATGACCTGGGTGCAGGATCAGCTGGATGATGAGACACTCTTCCCCTCCAAGATAGGAGTGCCCTTTCCCAAGAACTTTATGTCCGTGGCCAAGACTATTCTGAAGCGCCTGTTCAGAGTCTATGCCCACATCTACCACCAGCATTTTGACTCTGTGATGCAACTGCAGGAGGAGGCTCACCTCAACACCTCCTTCAAACACTTCATCTTCTTTGTCCAGGAGTTCAACCTCATTGATCGTCGTGAGCTGGCCCCTCTGCAGGACCTCATTGAGAAACTGGGCTCCAAGGACAGATAAACACCATCCGTCTATCGCACTCTAACCCCCCCCCGTCTTTCTGTAACTTCTTCACTTGgccttttctttctccctccattcATTTACCTGTATGTTTTCTGTTCTAGTTTtttgctctctccctctagttGTCTGTTGACATTGTTTCAGAGCTTGTTTTGTTAAAGCTCACTCTAGTCTTTAAGGTAAGATACCAGGGTGTAGtatattaaatgtattttttgggggtCGTTTTGTTAAACAAATTCTATAATTGGGACCTACTGACCTGAACTGTGGACCAATATAATTTAGGAGTTTAAATGGAAACCAACATTTCTTTCCTATAGGATTTACAagcacatacatttttttttttttttaactatcaTGTTTTTAGTCAATGTATTTAAATACTGTTTTTTGGATCTTGTATCTGGAACAGTTTttgtattttagatttttttccacTTAAGATGAACAAAGTTGCAAAAGTCAGGGGATATTGATCAATAAATATTTGCAGTGTCACTTGATATACTTGTGAAATAGATAATCTTCCATAGTTCATAAACAATCAGTGATCATATTTTTATGCTTGACTTAACTGCTTAGTTGTTATAAGGTATTTTAAGAGAACGCATTCAAGTATCAGAGGATGACATTTTGAAAACAAATTAAATGTAGTATAATGTGAATATTTCGATCTTTCTCATTTCACTCAAATAGCACAAAATGTGCCTCAGTTATGTTTTTACTATGTCAAATTCCTTGGATGTCTTTGTCCTTATGCTGGTACTTAATTGTAATATCAAGTCAATTcttgttttattgtttattaaaCATACCTTTACTC

Function

GO: NA

KEGG:

id description
K06685 MOB1, Mats; MOB kinase activator 1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1136694 lncRNA upstream 5251 58860629 ~ 58862743 (+) True G998886
TU1136695 lncRNA upstream 7736 58859397 ~ 58860258 (+) True G998887
TU1136691 lncRNA upstream 10235 58855210 ~ 58857759 (+) True G998885
TU1136697 lncRNA upstream 25245 58837981 ~ 58842749 (+) True LOC110536071
TU1136737 lncRNA upstream 46442 58821337 ~ 58821552 (+) True G998928
TU1136767 lncRNA downstream 13095 58895081 ~ 58895382 (+) True G998957
TU1136781 lncRNA downstream 34469 58916455 ~ 58916674 (+) True G998970
TU1136759 lncRNA downstream 123482 59005468 ~ 59006695 (+) True G998949
TU1137164 lncRNA downstream 143407 59025393 ~ 59025692 (+) True G999301
TU1137168 lncRNA downstream 148555 59030541 ~ 59030873 (+) True G999305
XM_036935919.1 mRNA upstream 16675 58762601 ~ 58851319 (+) False LOC110536071
XM_036935920.1 mRNA upstream 16675 58762601 ~ 58851319 (+) False LOC110536071
XM_021621601.2 mRNA upstream 145207 58720940 ~ 58722787 (+) False rilpl2
XM_021621598.2 mRNA upstream 147510 58692093 ~ 58720484 (+) False LOC110536067
XM_021621600.2 mRNA upstream 147510 58692093 ~ 58720484 (+) True LOC110536067
XM_021621604.2 mRNA downstream 1774 58883760 ~ 58889515 (+) True LOC110536072
XM_036935929.1 mRNA downstream 8314 58890300 ~ 58955743 (+) False smtnb
XM_036935928.1 mRNA downstream 8315 58890301 ~ 58951234 (+) False smtnb
XM_036935922.1 mRNA downstream 8315 58890301 ~ 58955743 (+) False smtnb
XM_036935923.1 mRNA downstream 8316 58890302 ~ 58955743 (+) False smtnb
TU1136311 other upstream 565007 58301585 ~ 58302987 (+) False G998557
TU1137372 other downstream 481915 59363901 ~ 59371176 (+) False LOC110536086
TU1137377 other downstream 481915 59363901 ~ 59371295 (+) False LOC110536086
TU1137378 other downstream 481915 59363901 ~ 59371409 (+) False LOC110536086
TU1137371 other downstream 481942 59363928 ~ 59371176 (+) False LOC110536086
TU1137373 other downstream 481942 59363928 ~ 59371409 (+) False LOC110536086

Expression Profile