Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021622235.2 |
| length | 1275 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 4 |
| gene id | LOC110536463 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 80021461 ~ 80023984 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006508 | proteolysis | biological_process |
| GO:0004252 | serine-type endopeptidase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1162923 | lncRNA | upstream | 8572 | 80013362 ~ 80013576 (+) | True | G1022137 |
| TU1162903 | lncRNA | upstream | 27306 | 79994637 ~ 79994842 (+) | True | G1022122 |
| TU1162724 | lncRNA | upstream | 99620 | 79919728 ~ 79922528 (+) | True | G1021989 |
| TU1162713 | lncRNA | upstream | 114648 | 79906703 ~ 79907500 (+) | True | G1021982 |
| TU1162710 | lncRNA | upstream | 118001 | 79903393 ~ 79904147 (+) | True | G1021979 |
| TU1162935 | lncRNA | downstream | 15255 | 80039239 ~ 80039521 (+) | True | G1022149 |
| TU1162937 | lncRNA | downstream | 21224 | 80045208 ~ 80052414 (+) | False | G1022151 |
| TU1162938 | lncRNA | downstream | 23074 | 80047058 ~ 80052414 (+) | True | G1022151 |
| TU1162940 | lncRNA | downstream | 29045 | 80053029 ~ 80054676 (+) | False | G1022153 |
| TU1162942 | lncRNA | downstream | 31032 | 80055016 ~ 80055459 (+) | True | G1022154 |
| XM_036936471.1 | mRNA | upstream | 145444 | 79861308 ~ 79876704 (+) | False | paqr3a |
| XM_036936472.1 | mRNA | upstream | 145444 | 79861308 ~ 79876704 (+) | True | paqr3a |
| XM_036936470.1 | mRNA | upstream | 535886 | 79332879 ~ 79486262 (+) | True | LOC110536457 |
| XM_036936465.1 | mRNA | upstream | 839622 | 79171897 ~ 79182526 (+) | False | LOC110536458 |
| XM_036936486.1 | mRNA | downstream | 112439 | 80136423 ~ 80158994 (+) | False | gc |
| XM_036936485.1 | mRNA | downstream | 112444 | 80136428 ~ 80158994 (+) | True | gc |
| XM_036936491.1 | mRNA | downstream | 154522 | 80178506 ~ 80282552 (+) | False | LOC110535134 |
| XM_036936492.1 | mRNA | downstream | 154523 | 80178507 ~ 80282123 (+) | False | LOC110535134 |
| XM_036936487.1 | mRNA | downstream | 154523 | 80178507 ~ 80282552 (+) | False | LOC110535134 |
| TU1162716 | other | upstream | 102543 | 79911325 ~ 79919605 (+) | True | G1021985 |
| TU1162604 | other | upstream | 274021 | 79747042 ~ 79748127 (+) | True | G1021894 |
| TU1162556 | other | upstream | 318004 | 79703242 ~ 79704144 (+) | True | G1021851 |
| TU1162489 | other | upstream | 380833 | 79640922 ~ 79641315 (+) | True | G1021790 |
| TU1161431 | other | upstream | 1150604 | 78870769 ~ 78871544 (+) | True | G1020950 |
| TU1162941 | other | downstream | 29695 | 80053679 ~ 80054676 (+) | True | G1022153 |
| TU1163559 | other | downstream | 586877 | 80610861 ~ 80612290 (+) | False | LOC110536472 |
| TU1164304 | other | downstream | 1261034 | 81285018 ~ 81285630 (+) | True | G1023251 |
| TU1164445 | other | downstream | 1473801 | 81497785 ~ 81543645 (+) | True | G1023377 |
| TU1165195 | other | downstream | 2103905 | 82127889 ~ 82130641 (+) | True | G1023978 |
