RNA id: TU1063762


Basic Information

Item Value
RNA id TU1063762
length 1038
lncRNA type inter_gene
GC content 0.60
exon number 1
gene id G933075
representative True

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 29993 ~ 31030 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ggctcccgccagcttctccgggatcggtcgcgttaccgcactggacgcctcgcggcgcccatctccgccactccggattcggggatctgaacccgactccctttcgatcggccgggggcgacggaggccatcgcccctcccttccgaacggcgttcgcccatctcttaggaccgactgacccatgttcaactgctgttcacatggaacccttctccacttcggtcttcaaagttctcgtttgaatatttgctactaccaccaagatctgcacccgcggcggctccacccgggcccgcgccctaggcttccgtgctcaccgcggcggccctcctactcgtcgcggcatagccctcgaggctctcgttgccagcgacggccgggtatgggcccgacgctccagcgccatccattttcagggctagttgattcggcaggtgagttgttacacactccttagcggattccgacttccatggccaccgtcctgctgtctatatcgaccaacaccttttctggggtctgatgagcgtcggcatcgggcgccttaacccggcgttcggttcatcccgcagcgccagttctgcttaccaaaagtggtacatttaaagtttgagaataggttgagatcgtttcggccccaagacctctaatcattcgctttaccagataaaactgcgagacttcgagcgccagctatcctgagggaaacttcggagggaaccagctactagatggttcgattagtctttcgcccctatacccaggtcggatgaccgatttgcacgtcaggaccgctacggacctccaccagagtttcctctggcttcgccctgcccaggcatagttcaccatctttcgggtcctatcgcatgcgctcacgctccacctccccgacaaagcgggcgagacgggccggtggtgcgcccgaccccgtagggtcgggatcccacctcagccgacacgcgccggccctcactttcattgcgccacggggtgtgttcggagaaaaccctctgacttgcgcatgcgttagactc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1063760 lncRNA downstream 5155 36185 ~ 37938 (+) True G933073
TU1063796 lncRNA downstream 77826 108856 ~ 110183 (+) True G933100
TU1063807 lncRNA downstream 98169 129199 ~ 129802 (+) True G933110
TU1063814 lncRNA downstream 110311 141341 ~ 141755 (+) True G933117
TU1063842 lncRNA downstream 149097 180127 ~ 181004 (+) True G933145
XM_036934636.1 mRNA downstream 32412 63442 ~ 88351 (+) True gars1
XM_036934638.1 mRNA downstream 162322 193352 ~ 307839 (+) False dlec1
XM_036934639.1 mRNA downstream 162401 193431 ~ 307840 (+) True dlec1
XM_036934640.1 mRNA downstream 309611 340641 ~ 378363 (+) True cry-dash
XM_036934643.1 mRNA downstream 361082 392112 ~ 435459 (+) False slc22a13b
TU1064305 other downstream 454800 485830 ~ 539412 (+) True LOC110535152
TU1064302 other downstream 530623 561653 ~ 562659 (+) False G933532
TU1064300 other downstream 530984 562014 ~ 562659 (+) True G933532
TU1064355 other downstream 565293 596323 ~ 604169 (+) True LOC110536523
TU1064476 other downstream 694157 725187 ~ 728205 (+) True G933679

Expression Profile