RNA id: TU1063807


Basic Information

Item Value
RNA id TU1063807
length 349
lncRNA type antisense_over
GC content 0.46
exon number 2
gene id G933110
representative True

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 129199 ~ 129802 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

CTGTAATTTATGGTTAGTTTACATTAGAGGTTGTAATGTATGGTTAGTTTAGATTAGAGGTTGTAATGTATGGTTAGTTTAGGTTGTCATGGTTACTTGATGTAGGCCTCTGTGCTGCTGGGGCCTTTGAGCTGGTCTTCCATCAGGTAGGTGTTGTGGGAAGAGCTGATAAAGTAGTGGTTGATTGGCTGGCTCATATCCTGGAACACCTTCTTGTGGGCGGGGTTGAAGATAGACCCCTCCTCCTGTTGCAGGTACATCAGGAAGCCATCTTTGGTCATGTGATTCATATGCTTTGCTGGTGGAGGGAATGTGGGGGGGCAGAATGAATTAGGGGATTGGGGATAGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1063796 lncRNA upstream 19016 108856 ~ 110183 (+) True G933100
TU1063760 lncRNA upstream 91261 36185 ~ 37938 (+) True G933073
TU1063762 lncRNA upstream 98169 29993 ~ 31030 (+) True G933075
TU1063814 lncRNA downstream 11539 141341 ~ 141755 (+) True G933117
TU1063842 lncRNA downstream 50325 180127 ~ 181004 (+) True G933145
TU1063870 lncRNA downstream 78318 208120 ~ 213206 (+) True G933162
TU1063882 lncRNA downstream 111323 241125 ~ 241638 (+) True G933174
TU1063894 lncRNA downstream 143072 272874 ~ 273180 (+) True G933185
XM_036934636.1 mRNA upstream 40848 63442 ~ 88351 (+) True gars1
XM_036934638.1 mRNA downstream 63550 193352 ~ 307839 (+) False dlec1
XM_036934639.1 mRNA downstream 63629 193431 ~ 307840 (+) True dlec1
XM_036934640.1 mRNA downstream 210839 340641 ~ 378363 (+) True cry-dash
XM_036934643.1 mRNA downstream 262310 392112 ~ 435459 (+) False slc22a13b
XM_036934642.1 mRNA downstream 262328 392130 ~ 438530 (+) False slc22a13b
TU1064305 other downstream 356028 485830 ~ 539412 (+) True LOC110535152
TU1064302 other downstream 431851 561653 ~ 562659 (+) False G933532
TU1064300 other downstream 432212 562014 ~ 562659 (+) True G933532
TU1064355 other downstream 466521 596323 ~ 604169 (+) True LOC110536523
TU1064476 other downstream 595385 725187 ~ 728205 (+) True G933679

Expression Profile