RNA id: TU1065700



Basic Information


Item Value
RNA id TU1065700
length 205
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G934658
representative True

Chromosome Information


Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 1980546 ~ 1986800 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gggatagacagggatagacagggatagacaagGGATAtaaaggggatagacaggggatagacagggatagacaggggtagacagggatagacggggcaGACAGGGGATGAACAGGGAATAGACAGGGAAtcgacaggggatagacagggaacagacaggggatATACATGGGTTAGAAACTGTTAGACATGGATAGAtatgggat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1065696 lncRNA upstream 20059 1955559 ~ 1960487 (+) True G934655
TU1065692 lncRNA upstream 42990 1937340 ~ 1937556 (+) True G934652
TU1065687 lncRNA upstream 59525 1920783 ~ 1921021 (+) True G934647
TU1065682 lncRNA upstream 64364 1915865 ~ 1916182 (+) True G934643
TU1065675 lncRNA upstream 76780 1903392 ~ 1903766 (+) True G934637
TU1065826 lncRNA downstream 7272 1994072 ~ 1994822 (+) True G934755
TU1065830 lncRNA downstream 9918 1996718 ~ 1996945 (+) True G934759
TU1065834 lncRNA downstream 12984 1999784 ~ 2000134 (+) True G934763
TU1065848 lncRNA downstream 22955 2009755 ~ 2010104 (+) True G934777
TU1065880 lncRNA downstream 31337 2018137 ~ 2018443 (+) True G934789
XM_021620030.2 mRNA upstream 124977 1843164 ~ 1855569 (+) False LOC110535167
XM_036934654.1 mRNA upstream 500918 1389373 ~ 1479628 (+) False nktr
XM_036934658.1 mRNA downstream 389901 2376701 ~ 2387592 (+) True si:ch73-206p6.1
XM_036934660.1 mRNA downstream 432539 2419339 ~ 2529660 (+) False plod2
XM_036934659.1 mRNA downstream 432546 2419346 ~ 2530974 (+) False plod2
XM_036934661.1 mRNA downstream 432546 2419346 ~ 2530974 (+) False plod2
XR_005034533.1 mRNA downstream 1261026 3247826 ~ 3249391 (+) False LOC118937290
TU1065679 other upstream 71466 1908660 ~ 1909080 (+) True G934640
TU1065592 other upstream 153180 1826627 ~ 1827366 (+) True G934579
TU1065194 other upstream 484532 1488076 ~ 1496014 (+) False G934256
TU1065095 other upstream 672787 1307527 ~ 1307759 (+) True G934169
TU1064658 other upstream 1028962 949531 ~ 951584 (+) True G933799
TU1067186 other downstream 1563239 3550039 ~ 3550487 (+) True G935846
TU1067342 other downstream 1993971 3980771 ~ 3981151 (+) True G935976
TU1067343 other downstream 1995051 3981851 ~ 3982198 (+) True G935977
TU1068725 other downstream 3033105 5019905 ~ 5021613 (+) False G937051
TU1068724 other downstream 3033360 5020160 ~ 5028145 (+) True G937051

Expression Profile