Item | Value |
---|---|
RNA id | TU1066446 |
length | 295 |
lncRNA type | inter_gene |
GC content | 0.49 |
exon number | 1 |
gene id | G935252 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_048575.1 |
NCBI id | CM023229.2 |
chromosome length | 86280908 |
location | 2679989 ~ 2680283 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
species | rainbow trout (Oncorhynchus mykiss) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU1066442 | lncRNA | upstream | 14535 | 2665210 ~ 2665454 (+) | True | G935248 |
TU1066440 | lncRNA | upstream | 15089 | 2664341 ~ 2664900 (+) | True | G935246 |
TU1066438 | lncRNA | upstream | 15961 | 2663655 ~ 2664028 (+) | True | G935244 |
TU1066425 | lncRNA | upstream | 26602 | 2653182 ~ 2653387 (+) | True | G935231 |
TU1066415 | lncRNA | upstream | 33738 | 2646023 ~ 2646251 (+) | True | G935221 |
TU1066477 | lncRNA | downstream | 19935 | 2700218 ~ 2700457 (+) | True | G935265 |
TU1066479 | lncRNA | downstream | 20417 | 2700700 ~ 2700931 (+) | True | G935267 |
TU1066498 | lncRNA | downstream | 33683 | 2713966 ~ 2714210 (+) | True | G935284 |
TU1066519 | lncRNA | downstream | 50319 | 2730602 ~ 2762438 (+) | True | G935300 |
TU1066579 | lncRNA | downstream | 102901 | 2783184 ~ 2783542 (+) | True | G935356 |
XM_036934659.1 | mRNA | upstream | 149015 | 2419346 ~ 2530974 (+) | False | plod2 |
XM_036934661.1 | mRNA | upstream | 149015 | 2419346 ~ 2530974 (+) | False | plod2 |
XM_036934660.1 | mRNA | upstream | 150329 | 2419339 ~ 2529660 (+) | False | plod2 |
XM_036934658.1 | mRNA | upstream | 292397 | 2376701 ~ 2387592 (+) | True | si:ch73-206p6.1 |
XM_021620030.2 | mRNA | upstream | 824420 | 1843164 ~ 1855569 (+) | False | LOC110535167 |
XR_005034533.1 | mRNA | downstream | 567543 | 3247826 ~ 3249391 (+) | False | LOC118937290 |
XR_005034785.1 | mRNA | downstream | 721769 | 3402052 ~ 3402867 (+) | True | LOC118937434 |
XM_021620035.2 | mRNA | downstream | 843274 | 3523557 ~ 3616312 (+) | False | jph1a |
XM_036934667.1 | mRNA | downstream | 843274 | 3523557 ~ 3616312 (+) | True | jph1a |
XM_021620039.2 | mRNA | downstream | 953657 | 3633940 ~ 3636886 (+) | True | LOC110535177 |
TU1065679 | other | upstream | 770909 | 1908660 ~ 1909080 (+) | True | G934640 |
TU1065592 | other | upstream | 852623 | 1826627 ~ 1827366 (+) | True | G934579 |
TU1065194 | other | upstream | 1183975 | 1488076 ~ 1496014 (+) | False | G934256 |
TU1065095 | other | upstream | 1372230 | 1307527 ~ 1307759 (+) | True | G934169 |
TU1064658 | other | upstream | 1728405 | 949531 ~ 951584 (+) | True | G933799 |
TU1067186 | other | downstream | 869756 | 3550039 ~ 3550487 (+) | True | G935846 |
TU1067342 | other | downstream | 1300488 | 3980771 ~ 3981151 (+) | True | G935976 |
TU1067343 | other | downstream | 1301568 | 3981851 ~ 3982198 (+) | True | G935977 |
TU1068725 | other | downstream | 2339622 | 5019905 ~ 5021613 (+) | False | G937051 |
TU1068724 | other | downstream | 2339877 | 5020160 ~ 5028145 (+) | True | G937051 |