Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1071404 |
| length | 247 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 1 |
| gene id | G939384 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 7550683 ~ 7550929 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1071235 | lncRNA | upstream | 110481 | 7439921 ~ 7440202 (+) | True | G939238 |
| TU1071232 | lncRNA | upstream | 113797 | 7436687 ~ 7436886 (+) | True | G939235 |
| TU1071160 | lncRNA | upstream | 223578 | 7325479 ~ 7327105 (+) | False | G939179 |
| TU1071161 | lncRNA | upstream | 224504 | 7325479 ~ 7326179 (+) | True | G939179 |
| TU1071158 | lncRNA | upstream | 225492 | 7324345 ~ 7325191 (+) | True | G939177 |
| TU1071407 | lncRNA | downstream | 1055 | 7551984 ~ 7552248 (+) | True | G939387 |
| TU1071473 | lncRNA | downstream | 100419 | 7651348 ~ 7651557 (+) | True | G939449 |
| TU1071475 | lncRNA | downstream | 102461 | 7653390 ~ 7653627 (+) | True | G939451 |
| TU1071476 | lncRNA | downstream | 103108 | 7654037 ~ 7654408 (+) | True | G939452 |
| TU1071477 | lncRNA | downstream | 105289 | 7656218 ~ 7656420 (+) | True | G939453 |
| XM_036934750.1 | mRNA | upstream | 48227 | 7447414 ~ 7502456 (+) | True | LOC110535203 |
| XM_036934749.1 | mRNA | upstream | 123420 | 7370843 ~ 7427263 (+) | False | LOC110535202 |
| XM_036934748.1 | mRNA | upstream | 123420 | 7370849 ~ 7427263 (+) | True | LOC110535202 |
| XM_036934747.1 | mRNA | upstream | 499279 | 7012348 ~ 7051404 (+) | False | LOC110535201 |
| LOC110536540 | mRNA | upstream | 875361 | 6659428 ~ 6675322 (+) | True | LOC110536540 |
| XM_021622308.2 | mRNA | downstream | 412080 | 7963009 ~ 7969001 (+) | True | LOC110536543 |
| XM_021620072.1 | mRNA | downstream | 418998 | 7969927 ~ 7971811 (+) | True | LOC110535207 |
| XR_005034786.1 | mRNA | downstream | 620943 | 8171872 ~ 8174025 (+) | True | LOC110536601 |
| XM_036936611.1 | mRNA | downstream | 623864 | 8174793 ~ 8175785 (+) | True | LOC118937436 |
| XM_021620079.2 | mRNA | downstream | 644678 | 8195607 ~ 8226038 (+) | False | LOC110535212 |
| TU1070683 | other | upstream | 529259 | 7019151 ~ 7021424 (+) | False | G938723 |
| TU1070682 | other | upstream | 529259 | 7021076 ~ 7021424 (+) | True | G938723 |
| TU1069683 | other | upstream | 1428414 | 6121584 ~ 6122269 (+) | False | G937889 |
| TU1068947 | other | upstream | 2045354 | 5504704 ~ 5505329 (+) | True | G937237 |
| TU1068784 | other | upstream | 2406118 | 5143317 ~ 5144565 (+) | True | G937096 |
| TU1071428 | other | downstream | 23423 | 7574352 ~ 7574909 (+) | True | G939408 |
| TU1071586 | other | downstream | 269591 | 7820520 ~ 7823317 (+) | True | G939544 |
| TU1071752 | other | downstream | 589337 | 8140266 ~ 8140583 (+) | True | G939690 |
| TU1072090 | other | downstream | 645439 | 8196368 ~ 8379328 (+) | True | LOC110535212 |
| TU1072199 | other | downstream | 823577 | 8374506 ~ 8377928 (+) | True | G940102 |
