Item | Value |
---|---|
RNA id | TU1072830 |
length | 278 |
lncRNA type | intronic |
GC content | 0.45 |
exon number | 2 |
gene id | G940632 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_048575.1 |
NCBI id | CM023229.2 |
chromosome length | 86280908 |
location | 9367051 ~ 9381784 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
species | rainbow trout (Oncorhynchus mykiss) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU1072769 | lncRNA | upstream | 24450 | 9297175 ~ 9342601 (+) | False | G940576 |
TU1072768 | lncRNA | upstream | 24651 | 9297107 ~ 9342400 (+) | False | G940576 |
TU1072770 | lncRNA | upstream | 64440 | 9297175 ~ 9302611 (+) | True | G940576 |
TU1072767 | lncRNA | upstream | 64537 | 9297175 ~ 9302514 (+) | False | G940576 |
TU1072781 | lncRNA | upstream | 85911 | 9280929 ~ 9281140 (+) | True | G940586 |
TU1072816 | lncRNA | downstream | 20647 | 9402431 ~ 9405490 (+) | True | LOC110535239 |
TU1072814 | lncRNA | downstream | 24520 | 9406304 ~ 9407558 (+) | True | G940618 |
TU1072812 | lncRNA | downstream | 26041 | 9407825 ~ 9409672 (+) | True | G940616 |
TU1072817 | lncRNA | downstream | 31405 | 9413189 ~ 9421918 (+) | True | G940620 |
TU1072859 | lncRNA | downstream | 36472 | 9418256 ~ 9419257 (+) | True | G940658 |
NM_001165190.1 | mRNA | upstream | 37468 | 9319032 ~ 9329583 (+) | True | LOC100305285 |
XM_036934807.1 | mRNA | upstream | 70092 | 9278925 ~ 9296959 (+) | False | LOC110535237 |
XM_036934809.1 | mRNA | upstream | 70092 | 9284416 ~ 9296959 (+) | True | LOC110535237 |
XR_005034814.1 | mRNA | upstream | 76187 | 9290727 ~ 9290864 (+) | True | LOC118937475 |
XR_005034544.1 | mRNA | upstream | 390647 | 8972920 ~ 8976404 (+) | True | LOC118937300 |
XR_005034552.1 | mRNA | downstream | 29094 | 9410878 ~ 9412277 (+) | True | LOC118937311 |
XM_021620129.2 | mRNA | downstream | 790065 | 10171849 ~ 10175528 (+) | False | LOC110535246 |
XM_021620131.2 | mRNA | downstream | 790231 | 10172015 ~ 10175528 (+) | False | LOC110535246 |
XM_021620130.2 | mRNA | downstream | 791004 | 10172788 ~ 10175528 (+) | True | LOC110535246 |
XR_005034554.1 | mRNA | downstream | 885480 | 10267264 ~ 10269419 (+) | True | LOC118937312 |
TU1072646 | other | upstream | 511614 | 8852494 ~ 8855437 (+) | True | LOC118937463 |
TU1072537 | other | upstream | 714530 | 8651504 ~ 8652521 (+) | False | G940376 |
TU1072470 | other | upstream | 826184 | 8532540 ~ 8540867 (+) | True | G940313 |
TU1072364 | other | upstream | 927276 | 8439480 ~ 8439775 (+) | True | G940247 |
TU1072200 | other | upstream | 985471 | 8379847 ~ 8381580 (+) | False | LOC110536544 |
TU1074217 | other | downstream | 863325 | 10245109 ~ 10245506 (+) | True | G941893 |
TU1075144 | other | downstream | 1728942 | 11110726 ~ 11111336 (+) | True | G942702 |
TU1077607 | other | downstream | 4005766 | 13387550 ~ 13394875 (+) | True | G944957 |
TU1079178 | other | downstream | 4682764 | 14064548 ~ 14065869 (+) | True | G946426 |
TU1079304 | other | downstream | 4773570 | 14155354 ~ 14170877 (+) | False | LOC110535304 |