Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1076180 |
| length | 393 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G943662 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 11918631 ~ 11919023 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1076179 | lncRNA | upstream | 1442 | 11916980 ~ 11917189 (+) | True | G943661 |
| TU1076171 | lncRNA | upstream | 9910 | 11907416 ~ 11908721 (+) | True | G943653 |
| TU1076132 | lncRNA | upstream | 27457 | 11889563 ~ 11891174 (+) | True | G943615 |
| TU1076133 | lncRNA | upstream | 29159 | 11887634 ~ 11889472 (+) | True | G943616 |
| TU1076151 | lncRNA | upstream | 87461 | 11830619 ~ 11831170 (+) | True | G943634 |
| TU1076228 | lncRNA | downstream | 60158 | 11979181 ~ 11979592 (+) | True | G943710 |
| TU1076233 | lncRNA | downstream | 62834 | 11981857 ~ 11991290 (+) | True | G943713 |
| TU1076270 | lncRNA | downstream | 134879 | 12053902 ~ 12054193 (+) | True | G943748 |
| TU1076271 | lncRNA | downstream | 135512 | 12054535 ~ 12054922 (+) | True | G943749 |
| TU1076272 | lncRNA | downstream | 136117 | 12055140 ~ 12055517 (+) | True | G943750 |
| XM_021620174.2 | mRNA | upstream | 32865 | 11798079 ~ 11885766 (+) | True | LOC110535274 |
| XM_021620172.2 | mRNA | upstream | 370391 | 11545457 ~ 11548240 (+) | True | LOC110535272 |
| XM_036934862.1 | mRNA | upstream | 377133 | 11499973 ~ 11541498 (+) | False | LOC110535269 |
| XR_002475232.2 | mRNA | downstream | 161240 | 12080263 ~ 12080894 (+) | True | LOC110535275 |
| XM_021620175.2 | mRNA | downstream | 257890 | 12176913 ~ 12191408 (+) | False | LOC110535276 |
| XM_021620176.2 | mRNA | downstream | 257890 | 12176913 ~ 12191408 (+) | False | LOC110535276 |
| XM_021620177.2 | mRNA | downstream | 257890 | 12176913 ~ 12191408 (+) | False | LOC110535276 |
| XM_021620178.2 | mRNA | downstream | 257890 | 12176913 ~ 12191408 (+) | True | LOC110535276 |
| TU1075144 | other | upstream | 807295 | 11110726 ~ 11111336 (+) | True | G942702 |
| TU1074217 | other | upstream | 1673125 | 10245109 ~ 10245506 (+) | True | G941893 |
| TU1072646 | other | upstream | 3063194 | 8852494 ~ 8855437 (+) | True | LOC118937463 |
| TU1072537 | other | upstream | 3266110 | 8651504 ~ 8652521 (+) | False | G940376 |
| TU1072470 | other | upstream | 3377764 | 8532540 ~ 8540867 (+) | True | G940313 |
| TU1077607 | other | downstream | 1468527 | 13387550 ~ 13394875 (+) | True | G944957 |
| TU1079178 | other | downstream | 2145525 | 14064548 ~ 14065869 (+) | True | G946426 |
| TU1079304 | other | downstream | 2236331 | 14155354 ~ 14170877 (+) | False | LOC110535304 |
| TU1079302 | other | downstream | 2252519 | 14171542 ~ 14202999 (+) | True | LOC110535304 |
| TU1079404 | other | downstream | 2391552 | 14310575 ~ 14314318 (+) | True | G946644 |
