Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1079390 |
| length | 483 |
| lncRNA type | intronic |
| GC content | 0.53 |
| exon number | 3 |
| gene id | G946635 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 14277039 ~ 14278140 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1079371 | lncRNA | upstream | 36725 | 14239836 ~ 14240314 (+) | True | G946616 |
| TU1079303 | lncRNA | upstream | 162472 | 14114083 ~ 14114567 (+) | True | G946549 |
| TU1079299 | lncRNA | upstream | 164526 | 14112293 ~ 14112513 (+) | True | G946545 |
| TU1079142 | lncRNA | upstream | 257279 | 14019324 ~ 14019760 (+) | True | G946390 |
| TU1079129 | lncRNA | upstream | 269722 | 14006606 ~ 14007317 (+) | True | G946377 |
| TU1079423 | lncRNA | downstream | 22830 | 14300970 ~ 14301208 (+) | True | G946663 |
| TU1079424 | lncRNA | downstream | 23527 | 14301667 ~ 14301920 (+) | True | G946664 |
| TU1079406 | lncRNA | downstream | 29561 | 14307701 ~ 14309785 (+) | True | G946646 |
| TU1079409 | lncRNA | downstream | 56195 | 14334335 ~ 14336622 (+) | True | G946649 |
| TU1079454 | lncRNA | downstream | 122664 | 14400804 ~ 14401022 (+) | True | G946691 |
| XM_021620218.2 | mRNA | upstream | 56539 | 14212415 ~ 14220500 (+) | False | ssr1 |
| XM_021620219.2 | mRNA | upstream | 56539 | 14212419 ~ 14220500 (+) | True | ssr1 |
| XM_036936641.1 | mRNA | upstream | 66693 | 14209150 ~ 14210346 (+) | True | LOC118937467 |
| XR_005034571.1 | mRNA | upstream | 74082 | 14154784 ~ 14202957 (+) | False | LOC110535304 |
| XR_005034574.1 | mRNA | downstream | 40602 | 14318742 ~ 14321570 (+) | True | LOC118936448 |
| LOC110536553 | mRNA | downstream | 43652 | 14321792 ~ 14329490 (+) | True | LOC110536553 |
| XM_036934937.1 | mRNA | downstream | 61997 | 14340137 ~ 14361493 (+) | False | oplah |
| XM_036934935.1 | mRNA | downstream | 61998 | 14340138 ~ 14361493 (+) | False | oplah |
| XM_036934938.1 | mRNA | downstream | 61998 | 14340138 ~ 14361493 (+) | True | oplah |
| TU1079302 | other | upstream | 74040 | 14171542 ~ 14202999 (+) | True | LOC110535304 |
| TU1079304 | other | upstream | 106162 | 14155354 ~ 14170877 (+) | False | LOC110535304 |
| TU1079178 | other | upstream | 211170 | 14064548 ~ 14065869 (+) | True | G946426 |
| TU1077607 | other | upstream | 882164 | 13387550 ~ 13394875 (+) | True | G944957 |
| TU1075144 | other | upstream | 3165703 | 11110726 ~ 11111336 (+) | True | G942702 |
| TU1079404 | other | downstream | 32435 | 14310575 ~ 14314318 (+) | True | G946644 |
| TU1079403 | other | downstream | 39868 | 14318008 ~ 14318623 (+) | True | G946643 |
| TU1079402 | other | downstream | 40525 | 14318665 ~ 14329336 (+) | True | G946642 |
| TU1079453 | other | downstream | 121722 | 14399862 ~ 14400273 (+) | True | G946690 |
| TU1079455 | other | downstream | 123114 | 14401254 ~ 14401644 (+) | True | G946692 |
