Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1079815 |
| length | 672 |
| lncRNA type | intronic |
| GC content | 0.56 |
| exon number | 3 |
| gene id | G946998 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 14580554 ~ 14581573 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1079758 | lncRNA | upstream | 66727 | 14513621 ~ 14513827 (+) | True | G946951 |
| TU1079468 | lncRNA | upstream | 68100 | 14512351 ~ 14512454 (+) | True | cpa6 |
| TU1079476 | lncRNA | upstream | 112940 | 14467278 ~ 14467614 (+) | True | G946712 |
| TU1079470 | lncRNA | upstream | 120335 | 14460006 ~ 14460219 (+) | True | G946706 |
| TU1079441 | lncRNA | upstream | 136159 | 14442754 ~ 14444395 (+) | True | G946678 |
| TU1079767 | lncRNA | downstream | 31895 | 14613468 ~ 14615178 (+) | True | G946955 |
| TU1079859 | lncRNA | downstream | 84153 | 14665726 ~ 14669246 (+) | False | LOC110535322 |
| TU1079861 | lncRNA | downstream | 84153 | 14665726 ~ 14669246 (+) | False | LOC110535322 |
| TU1079866 | lncRNA | downstream | 84153 | 14665726 ~ 14671958 (+) | False | LOC110535322 |
| TU1079868 | lncRNA | downstream | 84153 | 14665726 ~ 14669246 (+) | False | LOC110535322 |
| XM_036934956.1 | mRNA | upstream | 67344 | 14468990 ~ 14513210 (+) | False | cpa6 |
| XM_036934955.1 | mRNA | upstream | 67347 | 14468991 ~ 14513207 (+) | False | cpa6 |
| XM_021620237.2 | mRNA | upstream | 146746 | 14425465 ~ 14433808 (+) | False | emc9 |
| XM_021620239.2 | mRNA | upstream | 146746 | 14425780 ~ 14433808 (+) | True | emc9 |
| XM_036934949.1 | mRNA | upstream | 159201 | 14408367 ~ 14421353 (+) | False | si:ch211-217a12.1 |
| NM_001165048.1 | mRNA | downstream | 56686 | 14638259 ~ 14642624 (+) | True | csn5 |
| XM_036934964.1 | mRNA | downstream | 64069 | 14645642 ~ 14659439 (+) | False | ppp1r42 |
| XM_036934965.1 | mRNA | downstream | 64069 | 14645642 ~ 14659439 (+) | False | ppp1r42 |
| XM_036934966.1 | mRNA | downstream | 64069 | 14645642 ~ 14659439 (+) | True | ppp1r42 |
| XM_021620247.2 | mRNA | downstream | 78712 | 14660285 ~ 14663560 (+) | False | LOC110535321 |
| TU1079455 | other | upstream | 178910 | 14401254 ~ 14401644 (+) | True | G946692 |
| TU1079453 | other | upstream | 180281 | 14399862 ~ 14400273 (+) | True | G946690 |
| TU1079402 | other | upstream | 251218 | 14318665 ~ 14329336 (+) | True | G946642 |
| TU1079403 | other | upstream | 261931 | 14318008 ~ 14318623 (+) | True | G946643 |
| TU1079404 | other | upstream | 266236 | 14310575 ~ 14314318 (+) | True | G946644 |
| TU1079817 | other | downstream | 970 | 14582543 ~ 14584049 (+) | True | G946999 |
| TU1079869 | other | downstream | 84153 | 14665726 ~ 14669756 (+) | False | LOC110535322 |
| TU1080168 | other | downstream | 305041 | 14886614 ~ 14887282 (+) | True | G947301 |
| TU1080689 | other | downstream | 703606 | 15285179 ~ 15299373 (+) | True | spata13 |
| TU1080897 | other | downstream | 856108 | 15437681 ~ 15439862 (+) | False | LOC110535338 |
