Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1080280 |
| length | 455 |
| lncRNA type | antisense_over |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G947407 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 14905568 ~ 14906913 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1080271 | lncRNA | downstream | 13578 | 14891279 ~ 14891990 (-) | True | mtfr1 |
| TU1080270 | lncRNA | downstream | 17263 | 14887845 ~ 14888305 (-) | True | G947397 |
| TU1080223 | lncRNA | downstream | 79939 | 14815513 ~ 14825629 (-) | True | LOC110535326 |
| TU1080218 | lncRNA | downstream | 96824 | 14808409 ~ 14808744 (-) | True | G947347 |
| TU1080215 | lncRNA | downstream | 99770 | 14805512 ~ 14805798 (-) | True | G947344 |
| TU1080313 | lncRNA | upstream | 28959 | 14935872 ~ 14936076 (-) | True | G947439 |
| TU1080385 | lncRNA | upstream | 81903 | 14988816 ~ 14989049 (-) | True | G947511 |
| TU1080423 | lncRNA | upstream | 114624 | 15021537 ~ 15021801 (-) | True | G947547 |
| TU1080425 | lncRNA | upstream | 115160 | 15022073 ~ 15022498 (-) | True | G947549 |
| TU1080563 | lncRNA | upstream | 168474 | 15075387 ~ 15075661 (-) | True | G947672 |
| XM_021620266.2 | mRNA | downstream | 7989 | 14884317 ~ 14897579 (-) | False | mtfr1 |
| XM_021620264.2 | mRNA | downstream | 64909 | 14830974 ~ 14840659 (-) | True | LOC110535328 |
| XM_021620262.2 | mRNA | downstream | 65237 | 14830974 ~ 14840331 (-) | False | LOC110535328 |
| XM_021620263.2 | mRNA | downstream | 65526 | 14830974 ~ 14840042 (-) | False | LOC110535328 |
| XM_036934977.1 | mRNA | downstream | 65530 | 14830974 ~ 14840038 (-) | False | LOC110535328 |
| XM_021620269.2 | mRNA | upstream | 173611 | 15080524 ~ 15082767 (-) | True | LOC110535332 |
| XM_036936642.1 | mRNA | upstream | 312093 | 15219006 ~ 15221030 (-) | True | LOC118937468 |
| XM_021620270.2 | mRNA | upstream | 344358 | 15251271 ~ 15268657 (-) | True | LOC110535333 |
| XM_036934988.1 | mRNA | upstream | 532502 | 15439415 ~ 15455905 (-) | False | pan3 |
| XM_036934989.1 | mRNA | upstream | 532502 | 15439415 ~ 15455911 (-) | False | pan3 |
| TU1080269 | other | downstream | 18844 | 14884335 ~ 14886724 (-) | False | mtfr1 |
| TU1079569 | other | downstream | 589882 | 14312512 ~ 14315686 (-) | True | ly86 |
| TU1078013 | other | downstream | 2511430 | 12393397 ~ 12394138 (-) | True | G945345 |
| TU1076845 | other | downstream | 2546689 | 12348249 ~ 12358879 (-) | True | LOC110536549 |
| TU1075312 | other | downstream | 3825051 | 11078431 ~ 11080517 (-) | False | LOC110536548 |
| TU1080652 | other | upstream | 299518 | 15206431 ~ 15209597 (-) | True | G947750 |
| TU1080827 | other | upstream | 459037 | 15365950 ~ 15366301 (-) | True | G947894 |
| TU1081124 | other | upstream | 544414 | 15451327 ~ 15455744 (-) | True | pan3 |
| TU1081160 | other | upstream | 573755 | 15480668 ~ 15485240 (-) | False | pdx1 |
| TU1081161 | other | upstream | 573755 | 15480668 ~ 15484794 (-) | True | pdx1 |
