Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1080314 |
| length | 227 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G947440 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 14936678 ~ 14936904 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1080312 | lncRNA | upstream | 810 | 14935657 ~ 14935868 (+) | True | G947438 |
| TU1080300 | lncRNA | upstream | 8939 | 14927503 ~ 14927739 (+) | True | G947426 |
| TU1080144 | lncRNA | upstream | 17283 | 14919154 ~ 14919395 (+) | True | G947277 |
| TU1080205 | lncRNA | upstream | 35809 | 14900653 ~ 14900869 (+) | True | G947338 |
| TU1080169 | lncRNA | upstream | 46213 | 14889628 ~ 14890465 (+) | True | G947302 |
| TU1080317 | lncRNA | downstream | 3514 | 14940418 ~ 14940622 (+) | True | G947443 |
| TU1080323 | lncRNA | downstream | 7130 | 14944034 ~ 14944251 (+) | True | G947449 |
| TU1080334 | lncRNA | downstream | 20239 | 14957143 ~ 14957372 (+) | True | G947460 |
| TU1080348 | lncRNA | downstream | 28371 | 14965275 ~ 14965488 (+) | True | G947474 |
| TU1080349 | lncRNA | downstream | 28728 | 14965632 ~ 14966015 (+) | True | G947475 |
| XM_021620268.2 | mRNA | upstream | 18515 | 14905428 ~ 14918163 (+) | False | LOC110535331 |
| XM_021620267.2 | mRNA | upstream | 18515 | 14905435 ~ 14918163 (+) | True | LOC110535331 |
| XM_021620256.2 | mRNA | upstream | 54486 | 14840653 ~ 14882192 (+) | False | LOC110535327 |
| XR_005034577.1 | mRNA | downstream | 60975 | 14997879 ~ 15016727 (+) | True | LOC118937318 |
| XM_021620272.2 | mRNA | downstream | 332708 | 15269612 ~ 15277101 (+) | True | abhd10b |
| XM_021620273.2 | mRNA | downstream | 341570 | 15278474 ~ 15282213 (+) | False | tagln3b |
| XM_036934980.1 | mRNA | downstream | 342104 | 15279008 ~ 15282213 (+) | True | tagln3b |
| LOC110536556 | mRNA | downstream | 346391 | 15283295 ~ 15284424 (+) | True | LOC110536556 |
| TU1080168 | other | upstream | 49396 | 14886614 ~ 14887282 (+) | True | G947301 |
| TU1079869 | other | upstream | 266922 | 14665726 ~ 14669756 (+) | False | LOC110535322 |
| TU1079817 | other | upstream | 352629 | 14582543 ~ 14584049 (+) | True | G946999 |
| TU1079455 | other | upstream | 535034 | 14401254 ~ 14401644 (+) | True | G946692 |
| TU1079453 | other | upstream | 536405 | 14399862 ~ 14400273 (+) | True | G946690 |
| TU1080689 | other | downstream | 348275 | 15285179 ~ 15299373 (+) | True | spata13 |
| TU1080897 | other | downstream | 500777 | 15437681 ~ 15439862 (+) | False | LOC110535338 |
| TU1080898 | other | downstream | 500777 | 15437681 ~ 15439862 (+) | True | LOC110535338 |
| TU1080953 | other | downstream | 650926 | 15587830 ~ 15589776 (+) | True | rnf6 |
| TU1080943 | other | downstream | 715070 | 15651974 ~ 15659462 (+) | False | atp8a2 |
