Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1080546 |
| length | 223 |
| lncRNA type | inter_gene |
| GC content | 0.53 |
| exon number | 1 |
| gene id | G947661 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 15188404 ~ 15188626 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1080539 | lncRNA | upstream | 11649 | 15176463 ~ 15176755 (+) | True | G947654 |
| TU1080532 | lncRNA | upstream | 16139 | 15161734 ~ 15172265 (+) | True | G947648 |
| TU1080479 | lncRNA | upstream | 99000 | 15089092 ~ 15089404 (+) | True | G947599 |
| TU1080474 | lncRNA | upstream | 105351 | 15082851 ~ 15083053 (+) | True | G947594 |
| TU1080390 | lncRNA | upstream | 197207 | 14990946 ~ 14991197 (+) | True | G947516 |
| TU1080634 | lncRNA | downstream | 11396 | 15200022 ~ 15200359 (+) | True | G947742 |
| TU1080638 | lncRNA | downstream | 14932 | 15203558 ~ 15204096 (+) | False | G947745 |
| TU1080639 | lncRNA | downstream | 14932 | 15203558 ~ 15204228 (+) | True | G947745 |
| TU1080642 | lncRNA | downstream | 17003 | 15205629 ~ 15205952 (+) | True | G947748 |
| TU1080665 | lncRNA | downstream | 43384 | 15232010 ~ 15232325 (+) | True | G947760 |
| XR_005034577.1 | mRNA | upstream | 171677 | 14997879 ~ 15016727 (+) | True | LOC118937318 |
| XM_021620268.2 | mRNA | upstream | 270241 | 14905428 ~ 14918163 (+) | False | LOC110535331 |
| XM_021620267.2 | mRNA | upstream | 270241 | 14905435 ~ 14918163 (+) | True | LOC110535331 |
| XM_021620258.2 | mRNA | upstream | 306212 | 14840653 ~ 14882192 (+) | False | LOC110535327 |
| XM_021620272.2 | mRNA | downstream | 80986 | 15269612 ~ 15277101 (+) | True | abhd10b |
| XM_021620273.2 | mRNA | downstream | 89848 | 15278474 ~ 15282213 (+) | False | tagln3b |
| XM_036934980.1 | mRNA | downstream | 90382 | 15279008 ~ 15282213 (+) | True | tagln3b |
| LOC110536556 | mRNA | downstream | 94669 | 15283295 ~ 15284424 (+) | True | LOC110536556 |
| XM_036934981.1 | mRNA | downstream | 96416 | 15285042 ~ 15320246 (+) | False | spata13 |
| TU1080168 | other | upstream | 301122 | 14886614 ~ 14887282 (+) | True | G947301 |
| TU1079869 | other | upstream | 518648 | 14665726 ~ 14669756 (+) | False | LOC110535322 |
| TU1079817 | other | upstream | 604355 | 14582543 ~ 14584049 (+) | True | G946999 |
| TU1079455 | other | upstream | 786760 | 14401254 ~ 14401644 (+) | True | G946692 |
| TU1079453 | other | upstream | 788131 | 14399862 ~ 14400273 (+) | True | G946690 |
| TU1080689 | other | downstream | 96553 | 15285179 ~ 15299373 (+) | True | spata13 |
| TU1080897 | other | downstream | 249055 | 15437681 ~ 15439862 (+) | False | LOC110535338 |
| TU1080898 | other | downstream | 249055 | 15437681 ~ 15439862 (+) | True | LOC110535338 |
| TU1080953 | other | downstream | 399204 | 15587830 ~ 15589776 (+) | True | rnf6 |
| TU1080943 | other | downstream | 463348 | 15651974 ~ 15659462 (+) | False | atp8a2 |
