Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1080725 |
| length | 268 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G947811 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 15337924 ~ 15338191 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1080724 | lncRNA | upstream | 129 | 15337504 ~ 15337795 (+) | True | G947810 |
| TU1080677 | lncRNA | upstream | 91049 | 15246427 ~ 15246875 (+) | True | G947772 |
| TU1080670 | lncRNA | upstream | 96482 | 15241222 ~ 15241442 (+) | True | G947765 |
| TU1080667 | lncRNA | upstream | 103164 | 15234283 ~ 15234760 (+) | True | G947762 |
| TU1080666 | lncRNA | upstream | 104986 | 15232736 ~ 15232938 (+) | True | G947761 |
| TU1080727 | lncRNA | downstream | 1476 | 15339667 ~ 15339910 (+) | True | G947813 |
| TU1080820 | lncRNA | downstream | 15502 | 15353693 ~ 15353931 (+) | False | LOC110536557 |
| TU1080821 | lncRNA | downstream | 16061 | 15354252 ~ 15355812 (+) | True | LOC110536557 |
| TU1080826 | lncRNA | downstream | 27096 | 15365287 ~ 15365605 (+) | True | G947893 |
| TU1080829 | lncRNA | downstream | 30088 | 15368279 ~ 15368648 (+) | True | G947896 |
| XM_036934985.1 | mRNA | upstream | 734 | 15320582 ~ 15337190 (+) | True | tmprss7 |
| XM_036934981.1 | mRNA | upstream | 17678 | 15285042 ~ 15320246 (+) | False | spata13 |
| XM_036934987.1 | mRNA | downstream | 4170 | 15342361 ~ 15367543 (+) | False | LOC110536557 |
| XM_036936644.1 | mRNA | downstream | 37469 | 15375660 ~ 15478222 (+) | False | LOC110535338 |
| XM_021620280.2 | mRNA | downstream | 140394 | 15478585 ~ 15479868 (+) | True | urad |
| XM_021620284.2 | mRNA | downstream | 159270 | 15497461 ~ 15518161 (+) | False | lnx2a |
| XM_021620283.2 | mRNA | downstream | 159271 | 15497462 ~ 15518161 (+) | True | lnx2a |
| TU1080689 | other | upstream | 38551 | 15285179 ~ 15299373 (+) | True | spata13 |
| TU1080168 | other | upstream | 450642 | 14886614 ~ 14887282 (+) | True | G947301 |
| TU1079869 | other | upstream | 668168 | 14665726 ~ 14669756 (+) | False | LOC110535322 |
| TU1079817 | other | upstream | 753875 | 14582543 ~ 14584049 (+) | True | G946999 |
| TU1079455 | other | upstream | 936280 | 14401254 ~ 14401644 (+) | True | G946692 |
| TU1080897 | other | downstream | 99490 | 15437681 ~ 15439862 (+) | False | LOC110535338 |
| TU1080898 | other | downstream | 99490 | 15437681 ~ 15439862 (+) | True | LOC110535338 |
| TU1080953 | other | downstream | 249639 | 15587830 ~ 15589776 (+) | True | rnf6 |
| TU1080943 | other | downstream | 313783 | 15651974 ~ 15659462 (+) | False | atp8a2 |
| TU1081090 | other | downstream | 409182 | 15747373 ~ 15793034 (+) | True | boc |
