Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1080935 |
| length | 224 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 1 |
| gene id | G947984 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 15490288 ~ 15490511 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1080900 | lncRNA | upstream | 52670 | 15436326 ~ 15437618 (+) | True | G947956 |
| TU1080892 | lncRNA | upstream | 59408 | 15430587 ~ 15430880 (+) | True | G947952 |
| TU1080891 | lncRNA | upstream | 61904 | 15427930 ~ 15428384 (+) | True | G947951 |
| TU1080831 | lncRNA | upstream | 120890 | 15368920 ~ 15369398 (+) | True | G947898 |
| TU1080829 | lncRNA | upstream | 121640 | 15368279 ~ 15368648 (+) | True | G947896 |
| TU1080931 | lncRNA | downstream | 596 | 15491107 ~ 15491630 (+) | True | G947980 |
| TU1080970 | lncRNA | downstream | 27981 | 15518492 ~ 15518714 (+) | True | G947999 |
| TU1080971 | lncRNA | downstream | 29953 | 15520464 ~ 15520678 (+) | True | G948000 |
| TU1080979 | lncRNA | downstream | 35926 | 15526437 ~ 15529942 (+) | False | G948005 |
| TU1080980 | lncRNA | downstream | 35926 | 15526437 ~ 15528524 (+) | False | G948005 |
| XM_021620280.2 | mRNA | upstream | 10420 | 15478585 ~ 15479868 (+) | True | urad |
| XM_036936644.1 | mRNA | upstream | 12066 | 15375660 ~ 15478222 (+) | False | LOC110535338 |
| XM_036934987.1 | mRNA | upstream | 122745 | 15342361 ~ 15367543 (+) | False | LOC110536557 |
| XM_036934985.1 | mRNA | upstream | 153098 | 15320582 ~ 15337190 (+) | True | tmprss7 |
| XM_036934982.1 | mRNA | upstream | 170042 | 15285042 ~ 15320246 (+) | False | spata13 |
| XM_021620284.2 | mRNA | downstream | 6950 | 15497461 ~ 15518161 (+) | False | lnx2a |
| XM_021620283.2 | mRNA | downstream | 6951 | 15497462 ~ 15518161 (+) | True | lnx2a |
| XM_036934991.1 | mRNA | downstream | 39664 | 15530175 ~ 15534688 (+) | False | usp12a |
| XM_021620285.2 | mRNA | downstream | 39883 | 15530394 ~ 15534688 (+) | True | usp12a |
| XM_021620287.2 | mRNA | downstream | 49167 | 15539678 ~ 15547074 (+) | True | LOC110535348 |
| TU1080897 | other | upstream | 50426 | 15437681 ~ 15439862 (+) | False | LOC110535338 |
| TU1080898 | other | upstream | 50426 | 15437681 ~ 15439862 (+) | True | LOC110535338 |
| TU1080689 | other | upstream | 190915 | 15285179 ~ 15299373 (+) | True | spata13 |
| TU1080168 | other | upstream | 603006 | 14886614 ~ 14887282 (+) | True | G947301 |
| TU1079869 | other | upstream | 820532 | 14665726 ~ 14669756 (+) | False | LOC110535322 |
| TU1080953 | other | downstream | 97319 | 15587830 ~ 15589776 (+) | True | rnf6 |
| TU1080943 | other | downstream | 161463 | 15651974 ~ 15659462 (+) | False | atp8a2 |
| TU1081090 | other | downstream | 256862 | 15747373 ~ 15793034 (+) | True | boc |
| TU1081573 | other | downstream | 563554 | 16054065 ~ 16054638 (+) | True | G948524 |
| TU1081554 | other | downstream | 582905 | 16073416 ~ 16083282 (+) | False | sh3kbp1 |
