Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1081109 |
| length | 828 |
| lncRNA type | intronic |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G948115 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 15778985 ~ 15781343 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1081083 | lncRNA | upstream | 50091 | 15728690 ~ 15728894 (+) | True | G948092 |
| TU1081034 | lncRNA | upstream | 79347 | 15695190 ~ 15699638 (+) | True | G948049 |
| TU1080944 | lncRNA | upstream | 118622 | 15659011 ~ 15660363 (+) | False | atp8a2 |
| TU1081340 | lncRNA | downstream | 45955 | 15827298 ~ 15828220 (+) | True | G948318 |
| TU1081371 | lncRNA | downstream | 113101 | 15894444 ~ 15894934 (+) | True | G948347 |
| TU1081457 | lncRNA | downstream | 138742 | 15920085 ~ 15920430 (+) | True | G948410 |
| TU1081460 | lncRNA | downstream | 141216 | 15922559 ~ 15922830 (+) | True | G948413 |
| TU1081473 | lncRNA | downstream | 151849 | 15933192 ~ 15933423 (+) | True | G948426 |
| XM_021620297.2 | mRNA | upstream | 83871 | 15688261 ~ 15695114 (+) | False | spice1 |
| XM_021620298.2 | mRNA | upstream | 83871 | 15688261 ~ 15695114 (+) | False | spice1 |
| XR_002475244.2 | mRNA | upstream | 83871 | 15688261 ~ 15695114 (+) | True | spice1 |
| XM_021620299.2 | mRNA | upstream | 84231 | 15688260 ~ 15694754 (+) | False | spice1 |
| XM_036935009.1 | mRNA | upstream | 120050 | 15605884 ~ 15658935 (+) | False | atp8a2 |
| XM_036935015.1 | mRNA | downstream | 36032 | 15817375 ~ 15839784 (+) | True | atp6v1ab |
| XM_036935017.1 | mRNA | downstream | 60505 | 15841848 ~ 15857765 (+) | False | gramd1c |
| XM_036935018.1 | mRNA | downstream | 60508 | 15841851 ~ 15857765 (+) | True | gramd1c |
| XM_021620314.2 | mRNA | downstream | 77176 | 15858519 ~ 15865400 (+) | False | zdhhc23b |
| XM_021620315.2 | mRNA | downstream | 77176 | 15858519 ~ 15865400 (+) | True | zdhhc23b |
| TU1080943 | other | upstream | 119523 | 15651974 ~ 15659462 (+) | False | atp8a2 |
| TU1080953 | other | upstream | 189209 | 15587830 ~ 15589776 (+) | True | rnf6 |
| TU1080897 | other | upstream | 339123 | 15437681 ~ 15439862 (+) | False | LOC110535338 |
| TU1080898 | other | upstream | 339123 | 15437681 ~ 15439862 (+) | True | LOC110535338 |
| TU1080689 | other | upstream | 479612 | 15285179 ~ 15299373 (+) | True | spata13 |
| TU1081573 | other | downstream | 272722 | 16054065 ~ 16054638 (+) | True | G948524 |
| TU1081554 | other | downstream | 292073 | 16073416 ~ 16083282 (+) | False | sh3kbp1 |
| TU1081677 | other | downstream | 428586 | 16209929 ~ 16210840 (+) | False | ccl20b |
| TU1081665 | other | downstream | 542007 | 16323350 ~ 16326407 (+) | True | G948587 |
| TU1081649 | other | downstream | 551714 | 16333057 ~ 16335292 (+) | True | LOC110535372 |
