Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1081460 |
| length | 272 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 1 |
| gene id | G948413 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 15922559 ~ 15922830 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1081457 | lncRNA | upstream | 2129 | 15920085 ~ 15920430 (+) | True | G948410 |
| TU1081371 | lncRNA | upstream | 27625 | 15894444 ~ 15894934 (+) | True | G948347 |
| TU1081340 | lncRNA | upstream | 94339 | 15827298 ~ 15828220 (+) | True | G948318 |
| TU1081109 | lncRNA | upstream | 141216 | 15778985 ~ 15781343 (+) | True | G948115 |
| TU1081110 | lncRNA | upstream | 142262 | 15779633 ~ 15780297 (+) | True | G948116 |
| TU1081473 | lncRNA | downstream | 10362 | 15933192 ~ 15933423 (+) | True | G948426 |
| TU1081495 | lncRNA | downstream | 29020 | 15951850 ~ 15952070 (+) | True | G948448 |
| TU1081529 | lncRNA | downstream | 57690 | 15980520 ~ 15980727 (+) | True | G948482 |
| TU1081533 | lncRNA | downstream | 61928 | 15984758 ~ 15985779 (+) | True | G948486 |
| TU1081541 | lncRNA | downstream | 81880 | 16004710 ~ 16004920 (+) | True | G948494 |
| XM_021620314.2 | mRNA | upstream | 57159 | 15858519 ~ 15865400 (+) | False | zdhhc23b |
| XM_021620315.2 | mRNA | upstream | 57159 | 15858519 ~ 15865400 (+) | True | zdhhc23b |
| XM_036935017.1 | mRNA | upstream | 64794 | 15841848 ~ 15857765 (+) | False | gramd1c |
| XM_036935018.1 | mRNA | upstream | 64794 | 15841851 ~ 15857765 (+) | True | gramd1c |
| XM_036935015.1 | mRNA | upstream | 82775 | 15817375 ~ 15839784 (+) | True | atp6v1ab |
| XM_021620324.2 | mRNA | downstream | 150485 | 16073315 ~ 16097197 (+) | False | sh3kbp1 |
| XM_021620321.2 | mRNA | downstream | 150497 | 16073327 ~ 16098499 (+) | False | sh3kbp1 |
| XM_021620322.2 | mRNA | downstream | 150497 | 16073327 ~ 16098499 (+) | False | sh3kbp1 |
| XM_021620323.2 | mRNA | downstream | 150497 | 16073327 ~ 16098499 (+) | False | sh3kbp1 |
| XM_021620318.2 | mRNA | downstream | 150500 | 16073330 ~ 16098499 (+) | False | sh3kbp1 |
| TU1081090 | other | upstream | 129525 | 15747373 ~ 15793034 (+) | True | boc |
| TU1080943 | other | upstream | 263097 | 15651974 ~ 15659462 (+) | False | atp8a2 |
| TU1080953 | other | upstream | 332783 | 15587830 ~ 15589776 (+) | True | rnf6 |
| TU1080897 | other | upstream | 482697 | 15437681 ~ 15439862 (+) | False | LOC110535338 |
| TU1081573 | other | downstream | 131235 | 16054065 ~ 16054638 (+) | True | G948524 |
| TU1081554 | other | downstream | 150586 | 16073416 ~ 16083282 (+) | False | sh3kbp1 |
| TU1081677 | other | downstream | 287099 | 16209929 ~ 16210840 (+) | False | ccl20b |
| TU1081665 | other | downstream | 400520 | 16323350 ~ 16326407 (+) | True | G948587 |
| TU1081649 | other | downstream | 410227 | 16333057 ~ 16335292 (+) | True | LOC110535372 |
