Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1081593 |
| length | 443 |
| lncRNA type | intronic |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G948542 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 16088465 ~ 16088974 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1081541 | lncRNA | upstream | 83545 | 16004710 ~ 16004920 (+) | True | G948494 |
| TU1081533 | lncRNA | upstream | 102686 | 15984758 ~ 15985779 (+) | True | G948486 |
| TU1081529 | lncRNA | upstream | 107738 | 15980520 ~ 15980727 (+) | True | G948482 |
| TU1081495 | lncRNA | upstream | 136395 | 15951850 ~ 15952070 (+) | True | G948448 |
| TU1081473 | lncRNA | upstream | 155042 | 15933192 ~ 15933423 (+) | True | G948426 |
| TU1081552 | lncRNA | downstream | 1430 | 16090404 ~ 16098497 (+) | True | sh3kbp1 |
| TU1081599 | lncRNA | downstream | 47773 | 16136747 ~ 16173715 (+) | False | G948545 |
| TU1081604 | lncRNA | downstream | 47773 | 16136747 ~ 16141454 (+) | False | G948545 |
| TU1081602 | lncRNA | downstream | 68597 | 16157571 ~ 16171306 (+) | True | G948545 |
| TU1081616 | lncRNA | downstream | 85318 | 16174292 ~ 16174572 (+) | True | G948554 |
| XM_021620314.2 | mRNA | upstream | 223065 | 15858519 ~ 15865400 (+) | False | zdhhc23b |
| XM_021620315.2 | mRNA | upstream | 223065 | 15858519 ~ 15865400 (+) | True | zdhhc23b |
| XM_036935017.1 | mRNA | upstream | 230700 | 15841848 ~ 15857765 (+) | False | gramd1c |
| XM_036935018.1 | mRNA | upstream | 230700 | 15841851 ~ 15857765 (+) | True | gramd1c |
| XM_036935015.1 | mRNA | upstream | 248681 | 15817375 ~ 15839784 (+) | True | atp6v1ab |
| XM_036935019.1 | mRNA | downstream | 9631 | 16098605 ~ 16205054 (+) | False | map3k15 |
| XM_036935020.1 | mRNA | downstream | 9631 | 16098605 ~ 16205054 (+) | False | map3k15 |
| XM_036935021.1 | mRNA | downstream | 9631 | 16098605 ~ 16205054 (+) | False | map3k15 |
| XM_036935022.1 | mRNA | downstream | 9631 | 16098605 ~ 16205054 (+) | False | map3k15 |
| XM_036935023.1 | mRNA | downstream | 9631 | 16098605 ~ 16205054 (+) | False | map3k15 |
| TU1081554 | other | upstream | 5183 | 16073416 ~ 16083282 (+) | False | sh3kbp1 |
| TU1081573 | other | upstream | 33827 | 16054065 ~ 16054638 (+) | True | G948524 |
| TU1081090 | other | upstream | 295431 | 15747373 ~ 15793034 (+) | True | boc |
| TU1080943 | other | upstream | 429003 | 15651974 ~ 15659462 (+) | False | atp8a2 |
| TU1080953 | other | upstream | 498689 | 15587830 ~ 15589776 (+) | True | rnf6 |
| TU1081677 | other | downstream | 120955 | 16209929 ~ 16210840 (+) | False | ccl20b |
| TU1081665 | other | downstream | 234376 | 16323350 ~ 16326407 (+) | True | G948587 |
| TU1081649 | other | downstream | 244083 | 16333057 ~ 16335292 (+) | True | LOC110535372 |
| TU1081652 | other | downstream | 454841 | 16543815 ~ 16545289 (+) | False | LOC110535387 |
| TU1081800 | other | downstream | 465226 | 16554200 ~ 16601892 (+) | True | G948710 |
