Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1081715 |
| length | 430 |
| lncRNA type | antisense_over |
| GC content | 0.47 |
| exon number | 1 |
| gene id | G948630 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 16299876 ~ 16300305 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1081710 | lncRNA | upstream | 699 | 16298938 ~ 16299177 (+) | True | G948626 |
| TU1081655 | lncRNA | upstream | 1274 | 16298356 ~ 16298602 (+) | True | G948577 |
| TU1081661 | lncRNA | upstream | 21393 | 16266146 ~ 16278483 (+) | True | G948583 |
| TU1081678 | lncRNA | upstream | 89036 | 16210391 ~ 16210840 (+) | True | ccl20b |
| TU1081616 | lncRNA | upstream | 125304 | 16174292 ~ 16174572 (+) | True | G948554 |
| TU1081714 | lncRNA | downstream | 1541 | 16301846 ~ 16302047 (+) | True | G948629 |
| TU1081712 | lncRNA | downstream | 2627 | 16302932 ~ 16308626 (+) | True | G948627 |
| TU1081723 | lncRNA | downstream | 21815 | 16322120 ~ 16322965 (+) | True | G948638 |
| TU1081654 | lncRNA | downstream | 91061 | 16391366 ~ 16392176 (+) | True | G948576 |
| TU1081635 | lncRNA | downstream | 104862 | 16405167 ~ 16408397 (+) | True | G948565 |
| XM_036935032.1 | mRNA | upstream | 9132 | 16288944 ~ 16290744 (+) | False | adipoqa |
| XM_036935031.1 | mRNA | upstream | 9133 | 16288947 ~ 16290743 (+) | True | adipoqa |
| XM_036935026.1 | mRNA | upstream | 24882 | 16254009 ~ 16274994 (+) | False | tnk2a |
| XM_036935033.1 | mRNA | downstream | 27088 | 16327393 ~ 16333614 (+) | False | LOC110535372 |
| XM_021620335.2 | mRNA | downstream | 27089 | 16327394 ~ 16333614 (+) | False | LOC110535372 |
| XM_021620334.2 | mRNA | downstream | 32509 | 16332814 ~ 16338373 (+) | False | LOC110535372 |
| XM_021620336.2 | mRNA | downstream | 43023 | 16343328 ~ 16355927 (+) | False | lrrc34 |
| XM_021620338.2 | mRNA | downstream | 43023 | 16343328 ~ 16355927 (+) | True | lrrc34 |
| TU1081677 | other | upstream | 89036 | 16209929 ~ 16210840 (+) | False | ccl20b |
| TU1081554 | other | upstream | 216594 | 16073416 ~ 16083282 (+) | False | sh3kbp1 |
| TU1081573 | other | upstream | 245238 | 16054065 ~ 16054638 (+) | True | G948524 |
| TU1081090 | other | upstream | 506842 | 15747373 ~ 15793034 (+) | True | boc |
| TU1080943 | other | upstream | 640414 | 15651974 ~ 15659462 (+) | False | atp8a2 |
| TU1081665 | other | downstream | 23045 | 16323350 ~ 16326407 (+) | True | G948587 |
| TU1081649 | other | downstream | 32752 | 16333057 ~ 16335292 (+) | True | LOC110535372 |
| TU1081652 | other | downstream | 243510 | 16543815 ~ 16545289 (+) | False | LOC110535387 |
| TU1081800 | other | downstream | 253895 | 16554200 ~ 16601892 (+) | True | G948710 |
| TU1085033 | other | downstream | 2826360 | 19126665 ~ 19127085 (+) | True | G951511 |
