Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1081654 |
| length | 811 |
| lncRNA type | intronic |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G948576 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 16391366 ~ 16392176 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1081723 | lncRNA | upstream | 68401 | 16322120 ~ 16322965 (+) | True | G948638 |
| TU1081712 | lncRNA | upstream | 82740 | 16302932 ~ 16308626 (+) | True | G948627 |
| TU1081714 | lncRNA | upstream | 89319 | 16301846 ~ 16302047 (+) | True | G948629 |
| TU1081715 | lncRNA | upstream | 91061 | 16299876 ~ 16300305 (+) | True | G948630 |
| TU1081710 | lncRNA | upstream | 92189 | 16298938 ~ 16299177 (+) | True | G948626 |
| TU1081635 | lncRNA | downstream | 12991 | 16405167 ~ 16408397 (+) | True | G948565 |
| TU1081759 | lncRNA | downstream | 79538 | 16471714 ~ 16472562 (+) | True | G948674 |
| TU1081646 | lncRNA | downstream | 86618 | 16478794 ~ 16480401 (+) | True | G948569 |
| TU1081760 | lncRNA | downstream | 92815 | 16484991 ~ 16485279 (+) | True | G948675 |
| TU1081762 | lncRNA | downstream | 96486 | 16488662 ~ 16489052 (+) | True | G948677 |
| XM_021620336.2 | mRNA | upstream | 35439 | 16343328 ~ 16355927 (+) | False | lrrc34 |
| XM_021620338.2 | mRNA | upstream | 35439 | 16343328 ~ 16355927 (+) | True | lrrc34 |
| XM_021620334.2 | mRNA | upstream | 52993 | 16332814 ~ 16338373 (+) | False | LOC110535372 |
| XM_036935033.1 | mRNA | upstream | 57752 | 16327393 ~ 16333614 (+) | False | LOC110535372 |
| XM_021620335.2 | mRNA | upstream | 57752 | 16327394 ~ 16333614 (+) | False | LOC110535372 |
| XM_036935039.1 | mRNA | downstream | 16469 | 16408645 ~ 16433176 (+) | False | LOC110535377 |
| XM_036935036.1 | mRNA | downstream | 17718 | 16409894 ~ 16433176 (+) | False | LOC110535377 |
| XM_021620347.2 | mRNA | downstream | 17719 | 16409895 ~ 16433176 (+) | False | LOC110535377 |
| XM_021620348.2 | mRNA | downstream | 17719 | 16409895 ~ 16433176 (+) | False | LOC110535377 |
| XM_021620351.2 | mRNA | downstream | 25321 | 16417497 ~ 16433176 (+) | False | LOC110535377 |
| TU1081649 | other | upstream | 56074 | 16333057 ~ 16335292 (+) | True | LOC110535372 |
| TU1081665 | other | upstream | 64959 | 16323350 ~ 16326407 (+) | True | G948587 |
| TU1081677 | other | upstream | 180526 | 16209929 ~ 16210840 (+) | False | ccl20b |
| TU1081554 | other | upstream | 308084 | 16073416 ~ 16083282 (+) | False | sh3kbp1 |
| TU1081573 | other | upstream | 336728 | 16054065 ~ 16054638 (+) | True | G948524 |
| TU1081652 | other | downstream | 151639 | 16543815 ~ 16545289 (+) | False | LOC110535387 |
| TU1081800 | other | downstream | 162024 | 16554200 ~ 16601892 (+) | True | G948710 |
| TU1085033 | other | downstream | 2734489 | 19126665 ~ 19127085 (+) | True | G951511 |
| TU1086071 | other | downstream | 3369089 | 19761265 ~ 19769353 (+) | False | phldb2b |
| TU1089657 | other | downstream | 6334377 | 22726553 ~ 22741247 (+) | True | tlcd4a |
