Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1082315 |
| length | 636 |
| lncRNA type | read_through |
| GC content | 0.45 |
| exon number | 2 |
| gene id | G949183 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 17513821 ~ 17520003 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1082268 | lncRNA | upstream | 54089 | 17428490 ~ 17459732 (+) | True | G949136 |
| TU1082250 | lncRNA | upstream | 110233 | 17403352 ~ 17403588 (+) | True | G949120 |
| TU1082240 | lncRNA | upstream | 126454 | 17387135 ~ 17387367 (+) | True | G949111 |
| TU1082234 | lncRNA | upstream | 154443 | 17359137 ~ 17359378 (+) | True | G949105 |
| TU1082232 | lncRNA | upstream | 157417 | 17356018 ~ 17356404 (+) | True | G949103 |
| TU1082391 | lncRNA | downstream | 114975 | 17634978 ~ 17636793 (+) | True | G949255 |
| TU1083478 | lncRNA | downstream | 149729 | 17669732 ~ 17669943 (+) | True | G950188 |
| TU1083516 | lncRNA | downstream | 169809 | 17689812 ~ 17690023 (+) | True | G950225 |
| TU1083539 | lncRNA | downstream | 188392 | 17708395 ~ 17708618 (+) | True | G950246 |
| TU1083626 | lncRNA | downstream | 310010 | 17830013 ~ 17830880 (+) | True | G950317 |
| XM_036935094.1 | mRNA | upstream | 49025 | 17444268 ~ 17464796 (+) | False | LOC110535414 |
| XM_036935095.1 | mRNA | upstream | 54703 | 17444268 ~ 17459118 (+) | False | LOC110535414 |
| XM_021620400.2 | mRNA | upstream | 67168 | 17444268 ~ 17446653 (+) | False | LOC110535414 |
| XM_036935093.1 | mRNA | upstream | 67641 | 17444268 ~ 17446180 (+) | False | LOC110535414 |
| XR_005034593.1 | mRNA | upstream | 122762 | 17386005 ~ 17391059 (+) | True | LOC118937326 |
| XM_036934625.1 | mRNA | downstream | 189684 | 17709687 ~ 17789321 (+) | False | tpk1 |
| XM_036934629.1 | mRNA | downstream | 189684 | 17709687 ~ 17789321 (+) | False | tpk1 |
| XM_036934630.1 | mRNA | downstream | 189684 | 17709687 ~ 17789321 (+) | False | tpk1 |
| XM_036934632.1 | mRNA | downstream | 189684 | 17709687 ~ 17789321 (+) | False | tpk1 |
| XM_036934633.1 | mRNA | downstream | 189684 | 17709687 ~ 17789321 (+) | False | tpk1 |
| TU1081800 | other | upstream | 911929 | 16554200 ~ 16601892 (+) | True | G948710 |
| TU1081652 | other | upstream | 968532 | 16543815 ~ 16545289 (+) | False | LOC110535387 |
| TU1081649 | other | upstream | 1178529 | 16333057 ~ 16335292 (+) | True | LOC110535372 |
| TU1081665 | other | upstream | 1187414 | 16323350 ~ 16326407 (+) | True | G948587 |
| TU1081677 | other | upstream | 1302981 | 16209929 ~ 16210840 (+) | False | ccl20b |
| TU1085033 | other | downstream | 1606662 | 19126665 ~ 19127085 (+) | True | G951511 |
| TU1086071 | other | downstream | 2241262 | 19761265 ~ 19769353 (+) | False | phldb2b |
| TU1089657 | other | downstream | 5206550 | 22726553 ~ 22741247 (+) | True | tlcd4a |
| TU1090807 | other | downstream | 6145285 | 23665288 ~ 23665930 (+) | True | G956728 |
| TU1090885 | other | downstream | 6255769 | 23775772 ~ 23776845 (+) | True | G956797 |
