Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1084580 |
| length | 701 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G951135 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 18481066 ~ 18481766 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1084573 | lncRNA | upstream | 5009 | 18475726 ~ 18476057 (+) | True | G951129 |
| TU1084536 | lncRNA | upstream | 25162 | 18455601 ~ 18455904 (+) | True | G951103 |
| TU1084183 | lncRNA | upstream | 111610 | 18360032 ~ 18369456 (+) | True | G950787 |
| TU1084156 | lncRNA | upstream | 163613 | 18316599 ~ 18317453 (+) | True | G950761 |
| TU1084053 | lncRNA | upstream | 242624 | 18234892 ~ 18238442 (+) | False | G950669 |
| TU1084633 | lncRNA | downstream | 44284 | 18526050 ~ 18526319 (+) | True | G951184 |
| TU1084690 | lncRNA | downstream | 80572 | 18562338 ~ 18564608 (+) | False | G951225 |
| TU1084692 | lncRNA | downstream | 80572 | 18562338 ~ 18595492 (+) | False | G951225 |
| TU1084684 | lncRNA | downstream | 98213 | 18579979 ~ 18583372 (+) | False | G951225 |
| TU1084693 | lncRNA | downstream | 104127 | 18585893 ~ 18595492 (+) | False | G951225 |
| XM_021620411.2 | mRNA | upstream | 276913 | 18192624 ~ 18204153 (+) | False | pex2 |
| XM_036935105.1 | mRNA | upstream | 499169 | 17960186 ~ 17981897 (+) | False | hnf4g |
| XM_021620408.2 | mRNA | upstream | 499172 | 17963626 ~ 17981894 (+) | True | hnf4g |
| XM_036935106.1 | mRNA | upstream | 521066 | 17949434 ~ 17960000 (+) | False | LOC110535422 |
| XM_021620419.2 | mRNA | downstream | 308404 | 18790170 ~ 18802871 (+) | False | LOC110535429 |
| XM_021620415.2 | mRNA | downstream | 308414 | 18790180 ~ 18802871 (+) | False | LOC110535429 |
| XM_021620416.2 | mRNA | downstream | 308418 | 18790184 ~ 18802871 (+) | False | LOC110535429 |
| XM_021620420.2 | mRNA | downstream | 308423 | 18790189 ~ 18802871 (+) | False | LOC110535429 |
| XM_021620418.2 | mRNA | downstream | 308425 | 18790191 ~ 18802871 (+) | False | LOC110535429 |
| TU1081800 | other | upstream | 1879174 | 16554200 ~ 16601892 (+) | True | G948710 |
| TU1081652 | other | upstream | 1935777 | 16543815 ~ 16545289 (+) | False | LOC110535387 |
| TU1081649 | other | upstream | 2145774 | 16333057 ~ 16335292 (+) | True | LOC110535372 |
| TU1081665 | other | upstream | 2154659 | 16323350 ~ 16326407 (+) | True | G948587 |
| TU1081677 | other | upstream | 2270226 | 16209929 ~ 16210840 (+) | False | ccl20b |
| TU1085033 | other | downstream | 644899 | 19126665 ~ 19127085 (+) | True | G951511 |
| TU1086071 | other | downstream | 1279499 | 19761265 ~ 19769353 (+) | False | phldb2b |
| TU1089657 | other | downstream | 4244787 | 22726553 ~ 22741247 (+) | True | tlcd4a |
| TU1090807 | other | downstream | 5183522 | 23665288 ~ 23665930 (+) | True | G956728 |
| TU1090885 | other | downstream | 5294006 | 23775772 ~ 23776845 (+) | True | G956797 |
