Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1090518 |
| length | 364 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G956480 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 23256033 ~ 23256396 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1090502 | lncRNA | upstream | 8306 | 23247433 ~ 23247727 (+) | True | G956465 |
| TU1089908 | lncRNA | upstream | 71805 | 23179974 ~ 23184228 (+) | True | G955919 |
| TU1089842 | lncRNA | upstream | 182572 | 23054117 ~ 23073461 (+) | True | G955854 |
| TU1089817 | lncRNA | upstream | 192020 | 23007660 ~ 23064013 (+) | True | G955830 |
| TU1089800 | lncRNA | upstream | 275570 | 22980133 ~ 22980463 (+) | True | G955814 |
| TU1090522 | lncRNA | downstream | 4746 | 23261142 ~ 23261366 (+) | True | G956484 |
| TU1090523 | lncRNA | downstream | 5260 | 23261656 ~ 23261858 (+) | True | G956485 |
| TU1090534 | lncRNA | downstream | 15048 | 23271444 ~ 23271804 (+) | True | G956494 |
| TU1090537 | lncRNA | downstream | 15952 | 23272348 ~ 23275299 (+) | False | G956496 |
| TU1090541 | lncRNA | downstream | 16476 | 23272872 ~ 23275120 (+) | False | G956496 |
| XM_021620520.2 | mRNA | upstream | 289230 | 22951161 ~ 22966803 (+) | False | ptbp2a |
| XM_021620521.2 | mRNA | upstream | 289230 | 22951161 ~ 22966803 (+) | True | ptbp2a |
| XM_021620517.2 | mRNA | upstream | 499056 | 22750723 ~ 22756977 (+) | False | LOC110535493 |
| XM_036935203.1 | mRNA | downstream | 73354 | 23329750 ~ 23365999 (+) | False | snx7 |
| XM_036935204.1 | mRNA | downstream | 73357 | 23329753 ~ 23365999 (+) | False | snx7 |
| XM_036935205.1 | mRNA | downstream | 81450 | 23337846 ~ 23365999 (+) | True | snx7 |
| XM_021620525.2 | mRNA | downstream | 125133 | 23381529 ~ 23387293 (+) | False | LOC110535498 |
| XR_005034600.1 | mRNA | downstream | 218739 | 23475135 ~ 23477150 (+) | True | LOC118937334 |
| TU1089657 | other | upstream | 514786 | 22726553 ~ 22741247 (+) | True | tlcd4a |
| TU1086071 | other | upstream | 3486680 | 19761265 ~ 19769353 (+) | False | phldb2b |
| TU1085033 | other | upstream | 4128948 | 19126665 ~ 19127085 (+) | True | G951511 |
| TU1081800 | other | upstream | 6654141 | 16554200 ~ 16601892 (+) | True | G948710 |
| TU1081652 | other | upstream | 6710744 | 16543815 ~ 16545289 (+) | False | LOC110535387 |
| TU1090807 | other | downstream | 408892 | 23665288 ~ 23665930 (+) | True | G956728 |
| TU1090885 | other | downstream | 519376 | 23775772 ~ 23776845 (+) | True | G956797 |
| TU1092128 | other | downstream | 1344075 | 24600471 ~ 24601653 (+) | True | G957942 |
| TU1092512 | other | downstream | 1538204 | 24794600 ~ 24795736 (+) | True | G958300 |
| TU1095116 | other | downstream | 3457229 | 26713625 ~ 26797294 (+) | False | G960696 |
