Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1090857 |
| length | 224 |
| lncRNA type | intronic |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G956777 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 23740741 ~ 23740964 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1090852 | lncRNA | upstream | 12115 | 23728330 ~ 23728626 (+) | True | G956772 |
| TU1090851 | lncRNA | upstream | 13325 | 23727097 ~ 23727416 (+) | True | G956771 |
| TU1090823 | lncRNA | upstream | 42673 | 23697779 ~ 23698068 (+) | True | G956744 |
| TU1090818 | lncRNA | upstream | 52261 | 23688275 ~ 23688480 (+) | True | G956739 |
| TU1090811 | lncRNA | upstream | 59317 | 23678080 ~ 23681424 (+) | True | G956732 |
| TU1090861 | lncRNA | downstream | 9046 | 23750010 ~ 23750258 (+) | True | G956781 |
| TU1090863 | lncRNA | downstream | 10898 | 23751862 ~ 23752291 (+) | True | G956783 |
| TU1090865 | lncRNA | downstream | 12312 | 23753276 ~ 23753502 (+) | True | G956785 |
| TU1090872 | lncRNA | downstream | 20796 | 23761760 ~ 23762039 (+) | True | G956792 |
| TU1090883 | lncRNA | downstream | 27074 | 23768038 ~ 23768562 (+) | True | G956795 |
| XM_036935212.1 | mRNA | upstream | 62447 | 23675584 ~ 23678294 (+) | True | eif1b |
| XM_021620541.2 | mRNA | upstream | 65258 | 23666722 ~ 23675483 (+) | False | LOC110535505 |
| XM_021620542.2 | mRNA | upstream | 65258 | 23666722 ~ 23675483 (+) | False | LOC110535505 |
| XM_021620543.2 | mRNA | upstream | 65258 | 23666954 ~ 23675483 (+) | True | LOC110535505 |
| XM_021620533.2 | mRNA | upstream | 79216 | 23635899 ~ 23661525 (+) | True | LOC110535501 |
| XM_021620553.2 | mRNA | downstream | 22064 | 23763028 ~ 23765913 (+) | False | ppp1r17 |
| XM_021620551.2 | mRNA | downstream | 22066 | 23763030 ~ 23765913 (+) | False | ppp1r17 |
| XM_021620552.2 | mRNA | downstream | 22167 | 23763131 ~ 23765913 (+) | True | ppp1r17 |
| XM_021620558.2 | mRNA | downstream | 236384 | 23977348 ~ 23996262 (+) | True | trdmt1 |
| XM_021620557.2 | mRNA | downstream | 255624 | 23996588 ~ 24049588 (+) | True | cubn |
| TU1090807 | other | upstream | 74811 | 23665288 ~ 23665930 (+) | True | G956728 |
| TU1089657 | other | upstream | 999494 | 22726553 ~ 22741247 (+) | True | tlcd4a |
| TU1086071 | other | upstream | 3971388 | 19761265 ~ 19769353 (+) | False | phldb2b |
| TU1085033 | other | upstream | 4613656 | 19126665 ~ 19127085 (+) | True | G951511 |
| TU1081800 | other | upstream | 7138849 | 16554200 ~ 16601892 (+) | True | G948710 |
| TU1090885 | other | downstream | 34808 | 23775772 ~ 23776845 (+) | True | G956797 |
| TU1092128 | other | downstream | 859507 | 24600471 ~ 24601653 (+) | True | G957942 |
| TU1092512 | other | downstream | 1053636 | 24794600 ~ 24795736 (+) | True | G958300 |
| TU1095116 | other | downstream | 2972661 | 26713625 ~ 26797294 (+) | False | G960696 |
| TU1095111 | other | downstream | 3008456 | 26749420 ~ 26751554 (+) | True | G960696 |
