Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1090945 |
| length | 297 |
| lncRNA type | intronic |
| GC content | 0.42 |
| exon number | 3 |
| gene id | G956856 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 23859269 ~ 23859787 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1090928 | lncRNA | upstream | 31539 | 23827231 ~ 23827730 (+) | True | G956839 |
| TU1090913 | lncRNA | upstream | 47172 | 23811621 ~ 23812097 (+) | True | G956824 |
| TU1090911 | lncRNA | upstream | 51316 | 23807727 ~ 23807953 (+) | True | G956822 |
| TU1090909 | lncRNA | upstream | 56000 | 23803053 ~ 23803269 (+) | True | G956820 |
| TU1090908 | lncRNA | upstream | 56810 | 23802201 ~ 23802459 (+) | True | G956819 |
| TU1090951 | lncRNA | downstream | 7866 | 23867653 ~ 23867897 (+) | True | G956862 |
| TU1090952 | lncRNA | downstream | 10399 | 23870186 ~ 23870407 (+) | True | G956863 |
| TU1090957 | lncRNA | downstream | 16800 | 23876587 ~ 23876813 (+) | True | G956868 |
| TU1091412 | lncRNA | downstream | 22774 | 23882561 ~ 23882849 (+) | True | G957279 |
| TU1091416 | lncRNA | downstream | 30242 | 23890029 ~ 23890149 (+) | True | G957283 |
| XM_021620553.2 | mRNA | upstream | 93356 | 23763028 ~ 23765913 (+) | False | ppp1r17 |
| XM_021620551.2 | mRNA | upstream | 93356 | 23763030 ~ 23765913 (+) | False | ppp1r17 |
| XM_021620552.2 | mRNA | upstream | 93356 | 23763131 ~ 23765913 (+) | True | ppp1r17 |
| XM_036935213.1 | mRNA | upstream | 111346 | 23723215 ~ 23747923 (+) | False | itprid1 |
| XM_021620558.2 | mRNA | downstream | 117561 | 23977348 ~ 23996262 (+) | True | trdmt1 |
| XM_021620557.2 | mRNA | downstream | 136801 | 23996588 ~ 24049588 (+) | True | cubn |
| XM_021620559.2 | mRNA | downstream | 198937 | 24058724 ~ 24094985 (+) | False | rsu1 |
| XM_021620560.2 | mRNA | downstream | 199989 | 24059776 ~ 24093463 (+) | True | rsu1 |
| XM_036935216.1 | mRNA | downstream | 237303 | 24097090 ~ 24101564 (+) | False | c1ql3a |
| TU1090885 | other | upstream | 82424 | 23775772 ~ 23776845 (+) | True | G956797 |
| TU1090807 | other | upstream | 193339 | 23665288 ~ 23665930 (+) | True | G956728 |
| TU1089657 | other | upstream | 1118022 | 22726553 ~ 22741247 (+) | True | tlcd4a |
| TU1086071 | other | upstream | 4089916 | 19761265 ~ 19769353 (+) | False | phldb2b |
| TU1085033 | other | upstream | 4732184 | 19126665 ~ 19127085 (+) | True | G951511 |
| TU1092128 | other | downstream | 740684 | 24600471 ~ 24601653 (+) | True | G957942 |
| TU1092512 | other | downstream | 934813 | 24794600 ~ 24795736 (+) | True | G958300 |
| TU1095116 | other | downstream | 2853838 | 26713625 ~ 26797294 (+) | False | G960696 |
| TU1095111 | other | downstream | 2889633 | 26749420 ~ 26751554 (+) | True | G960696 |
| TU1095242 | other | downstream | 3068889 | 26928676 ~ 26929027 (+) | True | G960816 |
