Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1091553 |
| length | 261 |
| lncRNA type | inter_gene |
| GC content | 0.56 |
| exon number | 1 |
| gene id | G957415 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 24153071 ~ 24153331 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1091552 | lncRNA | upstream | 788 | 24151974 ~ 24152283 (+) | True | G957414 |
| TU1091544 | lncRNA | upstream | 11387 | 24141445 ~ 24141684 (+) | True | G957407 |
| TU1091543 | lncRNA | upstream | 11765 | 24140823 ~ 24141306 (+) | True | G957406 |
| TU1091518 | lncRNA | upstream | 49374 | 24102158 ~ 24103697 (+) | True | c1ql3a |
| TU1091477 | lncRNA | upstream | 161947 | 23990555 ~ 23991124 (+) | True | G957344 |
| TU1091556 | lncRNA | downstream | 2411 | 24155742 ~ 24156009 (+) | True | G957417 |
| TU1091528 | lncRNA | downstream | 46054 | 24199385 ~ 24199770 (+) | True | G957391 |
| TU1091571 | lncRNA | downstream | 50454 | 24203785 ~ 24203992 (+) | True | G957432 |
| TU1091591 | lncRNA | downstream | 79407 | 24232738 ~ 24232993 (+) | True | G957452 |
| TU1091904 | lncRNA | downstream | 117857 | 24271188 ~ 24271403 (+) | True | G957738 |
| XM_021620562.2 | mRNA | upstream | 3400 | 24146476 ~ 24149671 (+) | True | dtx3l1 |
| XM_021620561.2 | mRNA | upstream | 49361 | 24097106 ~ 24103710 (+) | False | c1ql3a |
| XM_036935216.1 | mRNA | upstream | 51507 | 24097090 ~ 24101564 (+) | False | c1ql3a |
| XM_021620559.2 | mRNA | upstream | 58086 | 24058724 ~ 24094985 (+) | False | rsu1 |
| XM_021620565.2 | mRNA | downstream | 19765 | 24173096 ~ 24188768 (+) | False | LOC110535520 |
| XM_021620566.1 | mRNA | downstream | 19974 | 24173305 ~ 24188768 (+) | False | LOC110535520 |
| XM_021620564.2 | mRNA | downstream | 20435 | 24173766 ~ 24188767 (+) | True | LOC110535520 |
| XM_021620563.2 | mRNA | downstream | 35810 | 24189141 ~ 24198511 (+) | True | steap2 |
| XM_021620567.2 | mRNA | downstream | 142158 | 24295489 ~ 24367062 (+) | False | LOC110535521 |
| TU1090885 | other | upstream | 376226 | 23775772 ~ 23776845 (+) | True | G956797 |
| TU1090807 | other | upstream | 487141 | 23665288 ~ 23665930 (+) | True | G956728 |
| TU1089657 | other | upstream | 1411824 | 22726553 ~ 22741247 (+) | True | tlcd4a |
| TU1086071 | other | upstream | 4383718 | 19761265 ~ 19769353 (+) | False | phldb2b |
| TU1085033 | other | upstream | 5025986 | 19126665 ~ 19127085 (+) | True | G951511 |
| TU1092128 | other | downstream | 447140 | 24600471 ~ 24601653 (+) | True | G957942 |
| TU1092512 | other | downstream | 641269 | 24794600 ~ 24795736 (+) | True | G958300 |
| TU1095116 | other | downstream | 2560294 | 26713625 ~ 26797294 (+) | False | G960696 |
| TU1095111 | other | downstream | 2596089 | 26749420 ~ 26751554 (+) | True | G960696 |
| TU1095242 | other | downstream | 2775345 | 26928676 ~ 26929027 (+) | True | G960816 |
