Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1107938 |
| length | 205 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G972727 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 36252580 ~ 36252784 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1107908 | lncRNA | upstream | 56431 | 36195843 ~ 36196149 (+) | True | G972699 |
| TU1107907 | lncRNA | upstream | 57518 | 36194781 ~ 36195062 (+) | True | G972698 |
| TU1107896 | lncRNA | upstream | 70291 | 36182075 ~ 36182289 (+) | True | G972687 |
| TU1107897 | lncRNA | upstream | 70731 | 36181431 ~ 36181849 (+) | True | G972688 |
| TU1107871 | lncRNA | upstream | 93211 | 36158998 ~ 36159369 (+) | True | G972663 |
| TU1107965 | lncRNA | downstream | 37130 | 36289914 ~ 36351851 (+) | True | G972749 |
| TU1107957 | lncRNA | downstream | 38126 | 36290910 ~ 36291508 (+) | True | G972741 |
| TU1107960 | lncRNA | downstream | 39603 | 36292387 ~ 36295696 (+) | True | G972744 |
| TU1107958 | lncRNA | downstream | 49313 | 36302097 ~ 36302909 (+) | True | G972742 |
| TU1108698 | lncRNA | downstream | 580011 | 36832795 ~ 36833926 (+) | True | G973455 |
| XM_021620744.2 | mRNA | upstream | 19186 | 36231115 ~ 36233394 (+) | True | sox17 |
| XM_021619900.2 | mRNA | upstream | 61507 | 36189424 ~ 36191073 (+) | True | LOC110535014 |
| XM_021620743.2 | mRNA | upstream | 73482 | 36164789 ~ 36179098 (+) | True | LOC110535631 |
| XM_021620742.2 | mRNA | upstream | 94936 | 36151080 ~ 36157644 (+) | False | LOC110535630 |
| XM_021620745.2 | mRNA | downstream | 2439 | 36255223 ~ 36266074 (+) | True | LOC110535634 |
| XM_036935370.1 | mRNA | downstream | 91942 | 36344726 ~ 36461901 (+) | False | LOC110535637 |
| XM_021620750.2 | mRNA | downstream | 91943 | 36344727 ~ 36461901 (+) | True | LOC110535637 |
| XM_021620751.2 | mRNA | downstream | 222718 | 36475502 ~ 36489512 (+) | True | LOC110535639 |
| NM_001124699.2 | mRNA | downstream | 280149 | 36532933 ~ 36535742 (+) | True | c-myc |
| TU1107936 | other | upstream | 1994 | 36249973 ~ 36250586 (+) | True | G972725 |
| TU1105524 | other | upstream | 1730240 | 34517826 ~ 34522340 (+) | True | G970489 |
| TU1105305 | other | upstream | 2072532 | 34179703 ~ 34180048 (+) | True | G970283 |
| TU1105066 | other | upstream | 2081593 | 34163816 ~ 34170987 (+) | True | G970054 |
| TU1104738 | other | upstream | 2457519 | 33794375 ~ 33795061 (+) | True | G969752 |
| TU1109131 | other | downstream | 1289312 | 37542096 ~ 37543202 (+) | True | LOC110535658 |
| TU1109202 | other | downstream | 1398354 | 37651138 ~ 37679368 (+) | True | G973918 |
| TU1109337 | other | downstream | 1578737 | 37831521 ~ 37835335 (+) | True | lztfl1 |
| TU1109354 | other | downstream | 1767665 | 38020449 ~ 38038711 (+) | False | LOC110535015 |
| TU1109353 | other | downstream | 1789922 | 38042706 ~ 38043330 (+) | False | LOC110535015 |
