Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1111056 |
| length | 431 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G975600 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 38646319 ~ 38646749 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1110857 | lncRNA | upstream | 65809 | 38575726 ~ 38580510 (+) | True | G975412 |
| TU1110814 | lncRNA | upstream | 98545 | 38502760 ~ 38547774 (+) | True | G975372 |
| TU1110771 | lncRNA | upstream | 220685 | 38425402 ~ 38425634 (+) | True | G975330 |
| TU1110760 | lncRNA | upstream | 238130 | 38407679 ~ 38408189 (+) | True | G975319 |
| TU1110759 | lncRNA | upstream | 238926 | 38407180 ~ 38407393 (+) | True | G975318 |
| TU1111067 | lncRNA | downstream | 38933 | 38685682 ~ 38694642 (+) | False | G975605 |
| TU1111070 | lncRNA | downstream | 38933 | 38685682 ~ 38687528 (+) | False | G975605 |
| TU1111099 | lncRNA | downstream | 38933 | 38685682 ~ 38696041 (+) | False | G975605 |
| TU1111105 | lncRNA | downstream | 56182 | 38702931 ~ 38709798 (+) | False | G975605 |
| TU1111094 | lncRNA | downstream | 72635 | 38719384 ~ 38720174 (+) | False | G975605 |
| XM_021620821.2 | mRNA | upstream | 14616 | 38626261 ~ 38631703 (+) | False | LOC110535673 |
| XM_021620820.2 | mRNA | upstream | 14616 | 38626477 ~ 38631703 (+) | True | LOC110535673 |
| XM_021620823.2 | mRNA | upstream | 149208 | 38351571 ~ 38497111 (+) | False | LOC110535674 |
| XM_036935435.1 | mRNA | upstream | 149208 | 38351571 ~ 38497111 (+) | True | LOC110535674 |
| XM_036935431.1 | mRNA | upstream | 429061 | 38202443 ~ 38217258 (+) | False | LOC110535669 |
| XR_005034790.1 | mRNA | downstream | 186413 | 38833162 ~ 38834976 (+) | True | LOC118937440 |
| XR_005034791.1 | mRNA | downstream | 191418 | 38838167 ~ 38840060 (+) | True | LOC118937441 |
| XM_021620839.2 | mRNA | downstream | 304543 | 38951292 ~ 38954226 (+) | False | LOC110535679 |
| XM_021620837.2 | mRNA | downstream | 304543 | 38951292 ~ 38954353 (+) | True | LOC110535679 |
| XM_021620840.2 | mRNA | downstream | 343105 | 38989854 ~ 39004586 (+) | True | LOC110535680 |
| TU1109485 | other | upstream | 583219 | 38057798 ~ 38063100 (+) | True | G974184 |
| TU1109353 | other | upstream | 602989 | 38042706 ~ 38043330 (+) | False | LOC110535015 |
| TU1109354 | other | upstream | 607608 | 38020449 ~ 38038711 (+) | False | LOC110535015 |
| TU1109337 | other | upstream | 810984 | 37831521 ~ 37835335 (+) | True | lztfl1 |
| TU1109202 | other | upstream | 966951 | 37651138 ~ 37679368 (+) | True | G973918 |
| TU1111560 | other | downstream | 410927 | 39057676 ~ 39058011 (+) | True | G976017 |
| TU1113929 | other | downstream | 2121087 | 40767836 ~ 40768229 (+) | True | G978255 |
| TU1114082 | other | downstream | 2356327 | 41003076 ~ 41016088 (+) | True | G978396 |
| TU1115468 | other | downstream | 3431743 | 42078492 ~ 42078855 (+) | True | G979689 |
| TU1115777 | other | downstream | 3881771 | 42528520 ~ 42533308 (+) | True | G979965 |
