Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1113057 |
| length | 238 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G977405 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 40184447 ~ 40184684 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1113055 | lncRNA | upstream | 631 | 40183587 ~ 40183816 (+) | True | G977403 |
| TU1112791 | lncRNA | upstream | 57201 | 40126985 ~ 40127246 (+) | True | G977156 |
| TU1112781 | lncRNA | upstream | 80990 | 40103231 ~ 40103457 (+) | True | G977146 |
| TU1112777 | lncRNA | upstream | 100756 | 40083465 ~ 40083691 (+) | True | G977142 |
| TU1112760 | lncRNA | upstream | 123647 | 40060531 ~ 40060800 (+) | True | G977125 |
| TU1113061 | lncRNA | downstream | 3232 | 40187916 ~ 40188188 (+) | True | G977409 |
| TU1113920 | lncRNA | downstream | 578405 | 40763089 ~ 40763349 (+) | True | G978246 |
| TU1113993 | lncRNA | downstream | 674260 | 40858944 ~ 40862847 (+) | True | G978312 |
| TU1113977 | lncRNA | downstream | 689946 | 40874630 ~ 40876037 (+) | True | LOC110535697 |
| TU1114005 | lncRNA | downstream | 691992 | 40876676 ~ 40876937 (+) | True | G978324 |
| XM_021620867.2 | mRNA | upstream | 32720 | 40041739 ~ 40151727 (+) | True | ccser1 |
| XM_036935464.1 | mRNA | upstream | 37240 | 40041739 ~ 40147207 (+) | False | ccser1 |
| XM_021620868.2 | mRNA | upstream | 37271 | 40041739 ~ 40147176 (+) | False | ccser1 |
| XM_036935466.1 | mRNA | upstream | 145693 | 40015466 ~ 40038754 (+) | False | LOC110535019 |
| XM_021620870.2 | mRNA | downstream | 3637 | 40188321 ~ 40739490 (+) | False | grid2 |
| XR_002475295.2 | mRNA | downstream | 3637 | 40188321 ~ 40741589 (+) | False | grid2 |
| XM_021620869.2 | mRNA | downstream | 3638 | 40188322 ~ 40743994 (+) | True | grid2 |
| XM_021622364.2 | mRNA | downstream | 564051 | 40748735 ~ 40750507 (+) | True | LOC110536622 |
| XM_021620874.2 | mRNA | downstream | 602643 | 40787327 ~ 40814363 (+) | False | LOC110535695 |
| TU1111560 | other | upstream | 1126436 | 39057676 ~ 39058011 (+) | True | G976017 |
| TU1109485 | other | upstream | 2121347 | 38057798 ~ 38063100 (+) | True | G974184 |
| TU1109353 | other | upstream | 2141117 | 38042706 ~ 38043330 (+) | False | LOC110535015 |
| TU1109354 | other | upstream | 2145736 | 38020449 ~ 38038711 (+) | False | LOC110535015 |
| TU1109337 | other | upstream | 2349112 | 37831521 ~ 37835335 (+) | True | lztfl1 |
| TU1113929 | other | downstream | 583152 | 40767836 ~ 40768229 (+) | True | G978255 |
| TU1114082 | other | downstream | 818392 | 41003076 ~ 41016088 (+) | True | G978396 |
| TU1115468 | other | downstream | 1893808 | 42078492 ~ 42078855 (+) | True | G979689 |
| TU1115777 | other | downstream | 2343836 | 42528520 ~ 42533308 (+) | True | G979965 |
| TU1115850 | other | downstream | 2447140 | 42631824 ~ 42636709 (+) | False | G980019 |
