Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1115308 |
| length | 232 |
| lncRNA type | inter_gene |
| GC content | 0.55 |
| exon number | 2 |
| gene id | G979541 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 41929679 ~ 41933856 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1115224 | lncRNA | upstream | 119903 | 41809522 ~ 41809776 (+) | True | G979460 |
| TU1115039 | lncRNA | upstream | 177724 | 41716748 ~ 41751955 (+) | True | G979282 |
| TU1115004 | lncRNA | upstream | 227633 | 41649020 ~ 41702046 (+) | True | G979247 |
| TU1114991 | lncRNA | upstream | 296210 | 41633237 ~ 41633469 (+) | True | G979235 |
| TU1114959 | lncRNA | upstream | 352617 | 41570821 ~ 41577062 (+) | True | G979204 |
| TU1115312 | lncRNA | downstream | 6810 | 41940666 ~ 41969077 (+) | True | G979544 |
| TU1115398 | lncRNA | downstream | 80671 | 42014527 ~ 42014753 (+) | True | G979620 |
| TU1115401 | lncRNA | downstream | 88829 | 42022685 ~ 42022911 (+) | True | G979623 |
| TU1115439 | lncRNA | downstream | 120417 | 42054273 ~ 42054494 (+) | True | G979661 |
| TU1115442 | lncRNA | downstream | 121313 | 42055169 ~ 42055469 (+) | True | G979664 |
| XR_005034632.1 | mRNA | upstream | 168826 | 41715130 ~ 41760853 (+) | True | LOC118937354 |
| XR_005034795.1 | mRNA | upstream | 230429 | 41669796 ~ 41699250 (+) | True | LOC118937445 |
| XR_005034631.1 | mRNA | upstream | 297638 | 41626277 ~ 41632041 (+) | True | LOC118937352 |
| XM_036935486.1 | mRNA | upstream | 324964 | 41599317 ~ 41604715 (+) | False | LOC110535708 |
| XM_036935489.1 | mRNA | downstream | 212144 | 42146000 ~ 42156152 (+) | False | LOC110535709 |
| XM_021620900.2 | mRNA | downstream | 215638 | 42149494 ~ 42156152 (+) | False | LOC110535709 |
| XM_021620899.2 | mRNA | downstream | 215642 | 42149498 ~ 42157026 (+) | True | LOC110535709 |
| XM_021620908.2 | mRNA | downstream | 658152 | 42592008 ~ 42629083 (+) | False | slf1 |
| XM_021620907.2 | mRNA | downstream | 658153 | 42592009 ~ 42629731 (+) | False | slf1 |
| TU1114082 | other | upstream | 913591 | 41003076 ~ 41016088 (+) | True | G978396 |
| TU1113929 | other | upstream | 1161450 | 40767836 ~ 40768229 (+) | True | G978255 |
| TU1111560 | other | upstream | 2871668 | 39057676 ~ 39058011 (+) | True | G976017 |
| TU1109485 | other | upstream | 3866579 | 38057798 ~ 38063100 (+) | True | G974184 |
| TU1109353 | other | upstream | 3886349 | 38042706 ~ 38043330 (+) | False | LOC110535015 |
| TU1115468 | other | downstream | 144636 | 42078492 ~ 42078855 (+) | True | G979689 |
| TU1115777 | other | downstream | 594664 | 42528520 ~ 42533308 (+) | True | G979965 |
| TU1115850 | other | downstream | 697968 | 42631824 ~ 42636709 (+) | False | G980019 |
| TU1117647 | other | downstream | 1726518 | 43660374 ~ 43715297 (+) | True | G981690 |
| TU1118214 | other | downstream | 2347069 | 44280925 ~ 44285969 (+) | True | G982236 |
