Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1121108 |
| length | 2024 |
| lncRNA type | antisense_over |
| GC content | 0.46 |
| exon number | 12 |
| gene id | G984859 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 46128001 ~ 46133058 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
46,127,000
46,128,000
46,129,000
46,130,000
46,131,000
46,132,000
46,133,000
46,134,000
46,135,000
46,136,000
46,137,000
46,138,000
46,139,000
46,140,000
46,141,000
NC_048575.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1121106 | lncRNA | downstream | 354 | 46127426 ~ 46127647 (-) | True | G984858 |
| TU1121104 | lncRNA | downstream | 3456 | 46122845 ~ 46124545 (-) | True | G984856 |
| TU1121042 | lncRNA | downstream | 115276 | 46010752 ~ 46012725 (-) | False | G984809 |
| TU1121043 | lncRNA | downstream | 115276 | 46010752 ~ 46012725 (-) | True | G984809 |
| TU1120961 | lncRNA | downstream | 257778 | 45870010 ~ 45870223 (-) | True | G984742 |
| TU1121150 | lncRNA | upstream | 61125 | 46194183 ~ 46194733 (-) | True | G984893 |
| TU1121155 | lncRNA | upstream | 73403 | 46206461 ~ 46208003 (-) | True | LOC110535758 |
| TU1121172 | lncRNA | upstream | 92420 | 46225478 ~ 46225685 (-) | True | G984908 |
| TU1121173 | lncRNA | upstream | 96174 | 46229232 ~ 46229432 (-) | True | G984909 |
| TU1121175 | lncRNA | upstream | 97274 | 46230332 ~ 46230552 (-) | True | G984911 |
| XM_021620980.2 | mRNA | downstream | 1516 | 46107907 ~ 46126485 (-) | True | pes |
| XM_021620982.2 | mRNA | downstream | 22193 | 46085454 ~ 46105808 (-) | True | gal3st1a |
| XM_021620981.2 | mRNA | downstream | 22256 | 46085454 ~ 46105745 (-) | False | gal3st1a |
| XM_021620983.2 | mRNA | downstream | 22256 | 46085454 ~ 46105745 (-) | False | gal3st1a |
| XM_021620977.2 | mRNA | downstream | 47246 | 46067991 ~ 46080755 (-) | True | lztr1 |
| XM_036935548.1 | mRNA | upstream | 2568 | 46135626 ~ 46172608 (-) | True | pole |
| XM_036935550.1 | mRNA | upstream | 72431 | 46205489 ~ 46223078 (-) | False | LOC110535758 |
| XM_036935549.1 | mRNA | upstream | 72431 | 46205489 ~ 46223082 (-) | False | LOC110535758 |
| LOC110535030 | mRNA | upstream | 147138 | 46280196 ~ 46286223 (-) | False | LOC110535030 |
| XM_021621001.2 | mRNA | upstream | 198184 | 46331242 ~ 46335481 (-) | True | mmab |
| TU1120247 | other | downstream | 521584 | 45605724 ~ 45606417 (-) | True | G984166 |
| TU1119538 | other | downstream | 1027782 | 45099488 ~ 45100219 (-) | True | G983486 |
| TU1118823 | other | downstream | 1518059 | 44609409 ~ 44609942 (-) | True | G982818 |
| TU1116454 | other | downstream | 3491939 | 42634144 ~ 42636062 (-) | False | LOC110535714 |
| TU1121161 | other | upstream | 69651 | 46202709 ~ 46223081 (-) | False | LOC110535758 |
| TU1121488 | other | upstream | 406475 | 46539533 ~ 46541954 (-) | False | G985191 |
| TU1121490 | other | upstream | 406475 | 46539533 ~ 46541987 (-) | True | G985191 |
| TU1121981 | other | upstream | 459298 | 46592356 ~ 46602166 (-) | True | gltpa |
| TU1121999 | other | upstream | 513270 | 46646328 ~ 46646949 (-) | True | G985626 |
