Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1162548 |
| length | 230 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 1 |
| gene id | G1021843 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 79693021 ~ 79693250 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1162545 | lncRNA | downstream | 1740 | 79691056 ~ 79691281 (-) | True | G1021840 |
| TU1162494 | lncRNA | downstream | 47015 | 79645775 ~ 79646006 (-) | True | G1021795 |
| TU1162485 | lncRNA | downstream | 53531 | 79638814 ~ 79639490 (-) | True | G1021786 |
| TU1162483 | lncRNA | downstream | 55245 | 79637557 ~ 79637776 (-) | True | G1021784 |
| TU1162477 | lncRNA | downstream | 62908 | 79629851 ~ 79630113 (-) | True | G1021778 |
| TU1162568 | lncRNA | upstream | 24372 | 79717622 ~ 79717885 (-) | True | G1021861 |
| TU1162579 | lncRNA | upstream | 29468 | 79722718 ~ 79722921 (-) | True | G1021871 |
| TU1162589 | lncRNA | upstream | 41822 | 79735072 ~ 79735395 (-) | True | G1021879 |
| TU1162590 | lncRNA | upstream | 42855 | 79736105 ~ 79736360 (-) | True | G1021880 |
| TU1162594 | lncRNA | upstream | 44655 | 79737905 ~ 79738138 (-) | True | G1021884 |
| XM_036936468.1 | mRNA | downstream | 427525 | 79259311 ~ 79265496 (-) | False | LOC110535130 |
| XM_036936469.1 | mRNA | downstream | 427525 | 79259311 ~ 79265496 (-) | True | LOC110535130 |
| XM_036936467.1 | mRNA | downstream | 468522 | 79194873 ~ 79224499 (-) | True | LOC110536655 |
| XM_036936458.1 | mRNA | downstream | 895809 | 78776091 ~ 78797212 (-) | False | cnot6l |
| XM_036936476.1 | mRNA | upstream | 187768 | 79881018 ~ 79984912 (-) | False | LOC110535133 |
| XM_036936474.1 | mRNA | upstream | 187768 | 79881018 ~ 79984913 (-) | False | LOC110535133 |
| XM_036936475.1 | mRNA | upstream | 187768 | 79881018 ~ 79984913 (-) | False | LOC110535133 |
| XM_036936477.1 | mRNA | upstream | 312133 | 80005383 ~ 80007638 (-) | False | LOC110535132 |
| XR_005034754.1 | mRNA | upstream | 312133 | 80005383 ~ 80007638 (-) | False | LOC110535132 |
| TU1162332 | other | downstream | 269542 | 79422510 ~ 79423479 (-) | True | G1021664 |
| TU1161639 | other | downstream | 1058620 | 78633621 ~ 78634401 (-) | True | G1021129 |
| TU1161585 | other | downstream | 1126174 | 78553628 ~ 78566847 (-) | True | G1021084 |
| TU1161240 | other | downstream | 1205838 | 78485161 ~ 78487183 (-) | True | LOC110536450 |
| TU1160563 | other | downstream | 2065455 | 77620083 ~ 77627566 (-) | True | ccdc125 |
| TU1162558 | other | upstream | 11969 | 79705219 ~ 79705722 (-) | True | G1021853 |
| TU1162808 | other | upstream | 205679 | 79898929 ~ 79900131 (-) | True | LOC110535133 |
| TU1163264 | other | upstream | 462247 | 80155497 ~ 80159395 (-) | False | G1022395 |
| TU1163266 | other | upstream | 462247 | 80155497 ~ 80159395 (-) | False | G1022395 |
| TU1163268 | other | upstream | 462247 | 80155497 ~ 80159395 (-) | False | G1022395 |
