Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1167381 |
| length | 482 |
| lncRNA type | intronic |
| GC content | 0.46 |
| exon number | 3 |
| gene id | G1025709 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 84081540 ~ 84082380 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1167380 | lncRNA | downstream | 894 | 84060353 ~ 84080646 (-) | True | G1025708 |
| TU1167350 | lncRNA | downstream | 34283 | 84043774 ~ 84047257 (-) | True | G1025685 |
| TU1167349 | lncRNA | downstream | 45230 | 84031772 ~ 84036310 (-) | False | G1025684 |
| TU1167348 | lncRNA | downstream | 45788 | 84032314 ~ 84035752 (-) | True | G1025684 |
| TU1167373 | lncRNA | downstream | 57049 | 84020246 ~ 84024491 (-) | True | G1025701 |
| TU1167394 | lncRNA | upstream | 20834 | 84103214 ~ 84104323 (-) | True | G1025721 |
| TU1167402 | lncRNA | upstream | 25803 | 84108183 ~ 84109397 (-) | True | G1025728 |
| TU1167397 | lncRNA | upstream | 27159 | 84109539 ~ 84111486 (-) | True | G1025723 |
| TU1167398 | lncRNA | upstream | 29828 | 84112208 ~ 84112639 (-) | True | G1025724 |
| TU1167412 | lncRNA | upstream | 53865 | 84136245 ~ 84137394 (-) | True | G1025735 |
| XM_036936562.1 | mRNA | downstream | 98900 | 83927057 ~ 83982640 (-) | True | LOC110535142 |
| XM_036936559.1 | mRNA | downstream | 98902 | 83922608 ~ 83982638 (-) | False | LOC110535142 |
| XM_036936582.1 | mRNA | upstream | 152913 | 84235293 ~ 84380894 (-) | False | adamts3 |
| XM_036936580.1 | mRNA | upstream | 152913 | 84235293 ~ 84426152 (-) | False | adamts3 |
| XM_036936581.1 | mRNA | upstream | 152913 | 84235293 ~ 84426152 (-) | False | adamts3 |
| XM_036936583.1 | mRNA | upstream | 152913 | 84235293 ~ 84426152 (-) | True | adamts3 |
| XM_036936585.1 | mRNA | upstream | 419505 | 84501885 ~ 84719806 (-) | False | smarca2 |
| TU1167230 | other | downstream | 178501 | 83873900 ~ 83903039 (-) | True | ypel1 |
| TU1167229 | other | downstream | 181064 | 83873900 ~ 83900476 (-) | False | ypel1 |
| TU1167110 | other | downstream | 362932 | 83716077 ~ 83718608 (-) | False | G1025498 |
| TU1167109 | other | downstream | 363653 | 83715683 ~ 83717887 (-) | False | G1025498 |
| TU1168443 | other | upstream | 1104946 | 85187326 ~ 85197500 (-) | False | G1026586 |
| TU1168973 | other | upstream | 1530972 | 85613352 ~ 85614375 (-) | True | G1026978 |
