Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1179610 |
| length | 4862 |
| RNA type | TUCP |
| GC content | 0.37 |
| exon number | 4 |
| gene id | hcn1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 9018507 ~ 9206417 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1179566 | lncRNA | downstream | 59207 | 8978164 ~ 8978380 (-) | True | G1035246 |
| TU1179565 | lncRNA | downstream | 59540 | 8977847 ~ 8978047 (-) | True | G1035245 |
| TU1179485 | lncRNA | downstream | 152838 | 8883561 ~ 8884749 (-) | True | G1035180 |
| TU1179470 | lncRNA | downstream | 171896 | 8863113 ~ 8865691 (-) | True | G1035170 |
| TU1179462 | lncRNA | downstream | 185330 | 8851866 ~ 8852257 (-) | True | G1035168 |
| TU1179688 | lncRNA | upstream | 37386 | 9080066 ~ 9081371 (-) | True | G1035295 |
| TU1179694 | lncRNA | upstream | 51474 | 9094154 ~ 9095023 (-) | True | G1035301 |
| TU1179699 | lncRNA | upstream | 55293 | 9097973 ~ 9098563 (-) | True | G1035306 |
| TU1179706 | lncRNA | upstream | 74489 | 9117169 ~ 9117839 (-) | True | G1035312 |
| TU1179732 | lncRNA | upstream | 116465 | 9159145 ~ 9159706 (-) | False | G1035335 |
| XR_005034854.1 | mRNA | downstream | 15365 | 9015996 ~ 9022222 (-) | True | LOC110536920 |
| XM_021622597.2 | mRNA | downstream | 177520 | 8857631 ~ 8860067 (-) | True | esm1 |
| XM_036936830.1 | mRNA | downstream | 228034 | 8596735 ~ 8809553 (-) | True | arhgap24 |
| XM_036936831.1 | mRNA | downstream | 262819 | 8594329 ~ 8774768 (-) | False | arhgap24 |
| XM_021622595.2 | mRNA | downstream | 391605 | 8594329 ~ 8645982 (-) | False | arhgap24 |
| NM_001124318.1 | mRNA | upstream | 397 | 9043077 ~ 9206417 (-) | False | hcn1 |
| XM_036936840.1 | mRNA | upstream | 519423 | 9562103 ~ 9563516 (-) | False | LOC110536926 |
| XM_021622605.2 | mRNA | upstream | 519423 | 9562103 ~ 9564000 (-) | True | LOC110536926 |
| XR_002475525.2 | mRNA | upstream | 643609 | 9686289 ~ 9689055 (-) | False | LOC110536932 |
| XM_036936859.1 | mRNA | upstream | 652402 | 9695082 ~ 9750067 (-) | False | nedd4l |
| TU1179454 | other | downstream | 198753 | 8836256 ~ 8838834 (-) | True | G1035160 |
| TU1178862 | other | downstream | 757721 | 8279339 ~ 8279866 (-) | True | G1034667 |
| TU1178568 | other | downstream | 1203009 | 7827880 ~ 7834578 (-) | True | G1034443 |
| TU1178484 | other | downstream | 1255549 | 7721252 ~ 7782038 (-) | True | LOC110523118 |
| TU1176586 | other | downstream | 2837253 | 6197017 ~ 6200334 (-) | True | G1032941 |
| TU1180145 | other | upstream | 490820 | 9533500 ~ 9548135 (-) | False | G1035717 |
| TU1180323 | other | upstream | 643349 | 9686029 ~ 9689042 (-) | False | LOC110536932 |
| TU1180320 | other | upstream | 643605 | 9686285 ~ 9689042 (-) | False | LOC110536932 |
| TU1180324 | other | upstream | 643605 | 9686285 ~ 9689042 (-) | True | LOC110536932 |
| TU1181316 | other | upstream | 862624 | 9905304 ~ 9909831 (-) | False | sema4d |
