Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1180703 |
| length | 2252 |
| lncRNA type | sense_over |
| GC content | 0.42 |
| exon number | 3 |
| gene id | ctif |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 10237527 ~ 10430266 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1180848 | lncRNA | upstream | 16990 | 10406940 ~ 10409921 (+) | True | G1036294 |
| TU1180788 | lncRNA | upstream | 58156 | 10348273 ~ 10368755 (+) | True | G1036240 |
| TU1180819 | lncRNA | upstream | 75146 | 10349106 ~ 10351765 (+) | True | G1036266 |
| TU1180780 | lncRNA | upstream | 75266 | 10346706 ~ 10351645 (+) | False | G1036240 |
| TU1180883 | lncRNA | downstream | 44704 | 10474883 ~ 10477600 (+) | True | G1036320 |
| TU1180897 | lncRNA | downstream | 91339 | 10521518 ~ 10538140 (+) | True | G1036334 |
| TU1180911 | lncRNA | downstream | 134964 | 10565143 ~ 10566030 (+) | True | G1036348 |
| TU1180955 | lncRNA | downstream | 204894 | 10635073 ~ 10636529 (+) | False | G1036383 |
| TU1180957 | lncRNA | downstream | 204894 | 10635073 ~ 10802041 (+) | True | G1036383 |
| XM_036936877.1 | mRNA | upstream | 346525 | 10020244 ~ 10080386 (+) | False | shc3 |
| XM_036936863.1 | mRNA | upstream | 550616 | 9846974 ~ 9876295 (+) | False | agxt2 |
| XM_036936864.1 | mRNA | upstream | 550616 | 9853868 ~ 9876295 (+) | False | agxt2 |
| XR_005034855.1 | mRNA | upstream | 555987 | 9846969 ~ 9870924 (+) | False | agxt2 |
| NM_001124599.1 | mRNA | upstream | 586252 | 9832735 ~ 9840659 (+) | True | prlra |
| XM_036936898.1 | mRNA | downstream | 441135 | 10871314 ~ 10921969 (+) | False | LOC110536952 |
| XM_036936895.1 | mRNA | downstream | 441135 | 10871314 ~ 10923075 (+) | False | LOC110536952 |
| XM_036936894.1 | mRNA | downstream | 441135 | 10871314 ~ 10923091 (+) | False | LOC110536952 |
| XM_036936897.1 | mRNA | downstream | 441135 | 10871314 ~ 10923091 (+) | False | LOC110536952 |
| XM_036936900.1 | mRNA | downstream | 441135 | 10871314 ~ 10923091 (+) | False | LOC110536952 |
| TU1180698 | other | upstream | 98 | 10424366 ~ 10426813 (+) | False | ctif |
| TU1180687 | other | upstream | 240498 | 10185716 ~ 10186413 (+) | True | G1036179 |
| TU1180480 | other | upstream | 516538 | 9907145 ~ 9910373 (+) | True | G1035997 |
| TU1180280 | other | upstream | 661922 | 9763247 ~ 9764989 (+) | True | G1035825 |
| TU1180049 | other | upstream | 878695 | 9540539 ~ 9548216 (+) | True | cplx4a |
| TU1180881 | other | downstream | 40136 | 10470315 ~ 10473073 (+) | True | G1036319 |
| TU1181161 | other | downstream | 528229 | 10958408 ~ 10961123 (+) | False | G1036562 |
| TU1182245 | other | downstream | 1021827 | 11452006 ~ 11455196 (+) | True | G1037472 |
| TU1182391 | other | downstream | 1138472 | 11568651 ~ 11572835 (+) | False | LOC110536961 |
| TU1184224 | other | downstream | 2694745 | 13124924 ~ 13126167 (+) | True | G1039147 |
