RNA id: XM_036937177.1



Basic Information


Item Value
RNA id XM_036937177.1
length 977
RNA type mRNA
GC content 0.40
exon number 2
gene id LOC118937642
representative True

Chromosome Information


Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 20910694 ~ 20912332 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TGTACATATCTGATCACATGTACAGTAGCTGACATGTGTACATATCTGATCACATGTACAGTAGCTGACGTGTGTACATATCTGATCACATATACCGTAGCTGACGTGTGTACATATCTGATCACATGTACAGTAGCTGATGTGTGTACATATCTGATCACATGTACAGTAGCTGACGTGTGTACATATCTGATCACATGTACAGTAGCTGACATGTGTACATATCTGATCACATGTACAGTAGCTGACGTGTGTACATATCTGATCACATATATCGTAGCTGACGTGTGTACATATCTGATCACATGTACAGTAGCTGACGTGTGTACATATCTGATCACATGTACAGTAGCTGACGTGTGTACATATCTGATCACATGTACAGTAGCTGATGTGTGTACATATCTGATCACGTGTACAGTAGCTGGCGTGTGTACATATCTGATCACATATACCGTAGCTGACGTGTGTACATTTCTGATCATATGTACAGTAGCTGATGTGTGTACATATCTGATCACATGTACAGTAGCTGACATGTGTACATATCTGATCACATATACCGTAGCTGACGTGTGTACATATCTGATCATATGTACAGTAGCTGACGTGTGTACATATCTGATCACCTGTACAGTAGCTGACGTGTGTACATATCTGATCACATGTACAGTAGCTGATGTGTGTACATATCTGATCACGTGTACAGTAGCTGGCATGTGTACATATCTGATCACGTGTACAGTAGCTGACGTGTGTACATATCTGATCACATGTACAGTAGCTGACATGTGTACATATCTGATCACGTGTACAGTAGCTGACGTGTGTACATATCTGATCACATGTACAGTAGCTGACATGTGTACATATCTGATCACATATACCGTAGCTGACGTGTGTACATTTCTGATCATATGTACAGTAGCTGACGTGTGTACATATATGATATGAAACAATTTAGCTCCATTGTTATG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1193913 lncRNA downstream 79979 20804058 ~ 20830715 (-) True G1047646
TU1193928 lncRNA downstream 83091 20826469 ~ 20827603 (-) True G1047660
TU1193898 lncRNA downstream 119080 20791224 ~ 20791614 (-) True LOC110537159
TU1193899 lncRNA downstream 120145 20790036 ~ 20790549 (-) False LOC110537159
TU1193785 lncRNA downstream 121168 20789274 ~ 20789526 (-) True G1047534
TU1194055 lncRNA upstream 79982 20992314 ~ 20992528 (-) True G1047758
TU1194065 lncRNA upstream 85997 20998329 ~ 20998830 (-) True G1047768
TU1194072 lncRNA upstream 93122 21005454 ~ 21005676 (-) True G1047775
TU1194202 lncRNA upstream 141566 21053898 ~ 21054693 (-) True G1047896
TU1194267 lncRNA upstream 214898 21127230 ~ 21127558 (-) True G1047961
XM_021622991.2 mRNA downstream 21714 20863971 ~ 20888980 (-) False LOC110537162
XM_021622987.2 mRNA downstream 21714 20863989 ~ 20888980 (-) False LOC110537162
XM_021622988.2 mRNA downstream 21714 20864019 ~ 20888980 (-) False LOC110537162
XM_021622990.2 mRNA downstream 21715 20862558 ~ 20888979 (-) False LOC110537162
XM_021623003.2 mRNA upstream 21622 20933954 ~ 20937604 (-) False LOC110537166
XM_036937179.1 mRNA upstream 21622 20933954 ~ 20937625 (-) False LOC110537166
XM_021623001.2 mRNA upstream 21622 20933954 ~ 20938247 (-) False LOC110537166
XM_021623002.2 mRNA upstream 21622 20933954 ~ 20938290 (-) False LOC110537166
XM_021623000.2 mRNA upstream 21627 20933959 ~ 20938307 (-) False LOC110537166
TU1193905 other downstream 44613 20862592 ~ 20866081 (-) True LOC110537162
TU1193723 other downstream 208654 20701540 ~ 20702040 (-) True G1047473
TU1193449 other downstream 311267 20509616 ~ 20599427 (-) True LOC110537156
TU1193559 other downstream 414266 20495565 ~ 20496428 (-) True G1047325
TU1192719 other downstream 972189 19913839 ~ 19938505 (-) True LOC110536814
TU1193952 other upstream 21629 20933961 ~ 20936901 (-) True LOC110537166
TU1195341 other upstream 872859 21785191 ~ 21785557 (-) True G1048931
TU1195401 other upstream 977206 21889538 ~ 21889869 (-) True G1048983
TU1195432 other upstream 1018851 21931183 ~ 21931785 (-) True G1049013
TU1195415 other upstream 1024999 21937331 ~ 21938200 (-) True G1048996

Expression Profile