RNA id: XR_005035314.1



Basic Information


Item Value
RNA id XR_005035314.1
length 94
RNA type mRNA
GC content 0.47
exon number 1
gene id LOC118937905
representative True

Chromosome Information


Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 43728080 ~ 43728173 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TTGCTGTGATGAAGTTTACTCCTGCCATTCGTAGTTTCCACCAGAGGTTGAAAGACCAAAGATGGCCCAATACCTTCCTTGGATGTCTGAGCGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1224354 lncRNA downstream 7232 43720301 ~ 43720848 (-) True G1075479
TU1224286 lncRNA downstream 53672 43674095 ~ 43674408 (-) True G1075412
TU1224124 lncRNA downstream 275747 43451348 ~ 43452333 (-) True G1075256
TU1223766 lncRNA downstream 793167 42927955 ~ 42934913 (-) False G1074918
TU1224375 lncRNA upstream 30256 43758429 ~ 43758850 (-) True LOC110537637
TU1224384 lncRNA upstream 42008 43770181 ~ 43770510 (-) True G1075506
TU1224388 lncRNA upstream 46402 43774575 ~ 43775191 (-) True G1075510
TU1224391 lncRNA upstream 52864 43781037 ~ 43781284 (-) True G1075513
TU1224394 lncRNA upstream 56883 43785056 ~ 43785287 (-) True G1075516
XR_005035312.1 mRNA downstream 698 43727289 ~ 43727382 (-) True LOC118937903
XR_005035311.1 mRNA downstream 1548 43726439 ~ 43726532 (-) True LOC118937902
XM_036937618.1 mRNA downstream 41818 43649096 ~ 43686262 (-) True LOC118937674
XR_005035296.1 mRNA downstream 152730 43546033 ~ 43575350 (-) True LOC118937884
XM_036937611.1 mRNA downstream 210298 42957437 ~ 43517782 (-) True LOC110538899
XR_005035310.1 mRNA upstream 586 43728759 ~ 43728852 (-) True LOC118937901
XM_021623824.2 mRNA upstream 29767 43757940 ~ 43769503 (-) False LOC110537637
XM_021623822.2 mRNA upstream 29767 43757940 ~ 43769513 (-) False LOC110537637
XM_021623823.2 mRNA upstream 29767 43757940 ~ 43769513 (-) False LOC110537637
XM_021623828.2 mRNA upstream 97304 43825477 ~ 43826368 (-) True LOC110537639
TU1224273 other downstream 67243 43660559 ~ 43660837 (-) True G1075399
TU1224206 other downstream 163840 43563785 ~ 43564240 (-) True G1075335
TU1223569 other downstream 1014157 42704003 ~ 42713923 (-) True G1074731
TU1221758 other downstream 1665448 42045863 ~ 42062632 (-) True G1073009
TU1220392 other downstream 2688149 41038866 ~ 41039931 (-) True G1071725
TU1224387 other upstream 45891 43774064 ~ 43774425 (-) True G1075509
TU1225419 other upstream 726475 44454648 ~ 44455270 (-) True G1076460
TU1225480 other upstream 818346 44546519 ~ 44600888 (-) False LOC110537661
TU1225479 other upstream 852585 44580758 ~ 44600888 (-) True LOC110537661
TU1225874 other upstream 1405679 45133852 ~ 45153337 (-) True gria4b

Expression Profile