Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00005856 |
| length | 1202 |
| lncRNA type | antisense_over |
| GC content | 0.44 |
| exon number | 4 |
| gene id | XLOC_002031 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 17459657 ~ 17497772 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0044260 | cellular macromolecule metabolic process | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0044020 | histone methyltransferase activity (H4-R3 specific) | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00005853 | lncRNA | upstream | 10887 | 17442234 ~ 17449039 (+) | True | XLOC_002028 |
| TCONS_00005852 | lncRNA | upstream | 21442 | 17438158 ~ 17438484 (+) | True | XLOC_002027 |
| TCONS_00005699 | lncRNA | upstream | 37903 | 17420675 ~ 17422023 (+) | True | XLOC_002026 |
| TCONS_00005851 | lncRNA | upstream | 194565 | 17263598 ~ 17265361 (+) | True | XLOC_002025 |
| TCONS_00005850 | lncRNA | upstream | 197671 | 17261485 ~ 17262255 (+) | True | XLOC_002024 |
| TCONS_00005861 | lncRNA | downstream | 115776 | 17583381 ~ 17587877 (+) | True | XLOC_002032 |
| TCONS_00003942 | lncRNA | downstream | 202068 | 17669673 ~ 17674093 (+) | True | XLOC_002033 |
| TCONS_00003948 | lncRNA | downstream | 248344 | 17715949 ~ 17721131 (+) | True | XLOC_002036 |
| TCONS_00005862 | lncRNA | downstream | 539518 | 18007123 ~ 18024486 (+) | False | XLOC_002042 |
| TCONS_00005700 | lncRNA | downstream | 539550 | 18007155 ~ 18071506 (+) | True | XLOC_002042 |
| TCONS_00003937 | mRNA | upstream | 26048 | 17235370 ~ 17433878 (+) | False | XLOC_002023 |
| TCONS_00003938 | mRNA | upstream | 27318 | 17371356 ~ 17432608 (+) | True | XLOC_002023 |
| TCONS_00003932 | mRNA | upstream | 359107 | 17088261 ~ 17100819 (+) | False | XLOC_002018 |
| TCONS_00003931 | mRNA | upstream | 397380 | 17026870 ~ 17062546 (+) | False | XLOC_002016 |
| TCONS_00003930 | mRNA | upstream | 397380 | 17026870 ~ 17062546 (+) | True | XLOC_002016 |
| TCONS_00003941 | mRNA | downstream | 124668 | 17592273 ~ 17674345 (+) | False | XLOC_002033 |
| TCONS_00003943 | mRNA | downstream | 213469 | 17681074 ~ 17691171 (+) | True | XLOC_002034 |
| TCONS_00003945 | mRNA | downstream | 245417 | 17713022 ~ 17726406 (+) | False | XLOC_002036 |
| TCONS_00003946 | mRNA | downstream | 247261 | 17714866 ~ 17728165 (+) | False | XLOC_002036 |
| TCONS_00003949 | mRNA | downstream | 280275 | 17747880 ~ 17759878 (+) | True | XLOC_002037 |
| TCONS_00003940 | other | upstream | 5354 | 17454490 ~ 17454572 (+) | True | XLOC_002030 |
| TCONS_00003939 | other | upstream | 6423 | 17453363 ~ 17453503 (+) | True | XLOC_002029 |
| TCONS_00003936 | other | upstream | 332478 | 17127316 ~ 17127448 (+) | True | XLOC_002022 |
| TCONS_00003935 | other | upstream | 334460 | 17125340 ~ 17125466 (+) | True | XLOC_002021 |
| TCONS_00003934 | other | upstream | 336426 | 17123368 ~ 17123500 (+) | True | XLOC_002020 |
| TCONS_00003944 | other | downstream | 227660 | 17695265 ~ 17695340 (+) | True | XLOC_002035 |
| TCONS_00003947 | other | downstream | 248301 | 17715906 ~ 17721131 (+) | False | XLOC_002036 |
| TCONS_00003954 | other | downstream | 422484 | 17890089 ~ 17890203 (+) | True | XLOC_002040 |
| TCONS_00003957 | other | downstream | 773193 | 18240798 ~ 18251068 (+) | True | XLOC_002043 |
| TCONS_00003963 | other | downstream | 1424442 | 18892047 ~ 18896604 (+) | True | XLOC_002046 |
