Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036937981.1 |
| length | 3702 |
| RNA type | mRNA |
| GC content | 0.58 |
| exon number | 23 |
| gene id | atxn2l |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 61813631 ~ 61833601 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
61,792,000
61,796,000
61,800,000
61,804,000
61,808,000
61,812,000
61,816,000
61,820,000
61,824,000
61,828,000
61,832,000
61,836,000
NC_048576.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1246310 | lncRNA | upstream | 5854 | 61807473 ~ 61807777 (+) | True | G1095866 |
| TU1246260 | lncRNA | upstream | 17547 | 61794193 ~ 61796084 (+) | True | sh2b1 |
| TU1246267 | lncRNA | upstream | 95991 | 61717368 ~ 61717640 (+) | True | G1095825 |
| TU1246233 | lncRNA | upstream | 136050 | 61636020 ~ 61677581 (+) | True | G1095792 |
| TU1246206 | lncRNA | upstream | 208779 | 61602937 ~ 61604852 (+) | True | G1095770 |
| TU1246329 | lncRNA | downstream | 14475 | 61848076 ~ 61849280 (+) | True | G1095883 |
| TU1246341 | lncRNA | downstream | 44570 | 61878171 ~ 61878429 (+) | True | G1095893 |
| TU1246342 | lncRNA | downstream | 45710 | 61879311 ~ 61879618 (+) | True | G1095894 |
| TU1246343 | lncRNA | downstream | 46263 | 61879864 ~ 61880367 (+) | True | G1095895 |
| TU1246348 | lncRNA | downstream | 59055 | 61892656 ~ 61892998 (+) | True | G1095900 |
| XM_036937982.1 | mRNA | upstream | 175 | 61794146 ~ 61813456 (+) | False | sh2b1 |
| XM_036937983.1 | mRNA | upstream | 175 | 61794146 ~ 61813456 (+) | False | sh2b1 |
| XM_036937984.1 | mRNA | upstream | 1756 | 61794148 ~ 61811875 (+) | False | sh2b1 |
| XM_021624384.2 | mRNA | upstream | 40899 | 61768417 ~ 61772732 (+) | True | LOC110537916 |
| XM_036937978.1 | mRNA | upstream | 60311 | 61724768 ~ 61753320 (+) | True | atp2a1 |
| XR_002475689.2 | mRNA | downstream | 1584 | 61835185 ~ 61836333 (+) | True | LOC110537918 |
| XM_021624391.2 | mRNA | downstream | 61146 | 61894747 ~ 61896190 (+) | False | nupr1b |
| XM_036937999.1 | mRNA | downstream | 118689 | 61952290 ~ 62003086 (+) | False | doc2a |
| XM_036937998.1 | mRNA | downstream | 118694 | 61952295 ~ 62003086 (+) | True | doc2a |
| XM_021624409.2 | mRNA | downstream | 337038 | 62170639 ~ 62185966 (+) | False | LOC110537935 |
| TU1245937 | other | upstream | 461286 | 61037739 ~ 61352345 (+) | True | G1095540 |
| TU1245870 | other | upstream | 848036 | 60954700 ~ 60965595 (+) | True | mmp25a |
| TU1245566 | other | upstream | 994734 | 60816491 ~ 60818897 (+) | True | G1095209 |
| TU1245572 | other | upstream | 1099619 | 60696687 ~ 60714012 (+) | True | LOC110539079 |
| TU1245603 | other | upstream | 1427658 | 60385664 ~ 60385973 (+) | True | G1095244 |
| TU1246640 | other | downstream | 612903 | 62446504 ~ 62447474 (+) | True | LOC118937701 |
| TU1247110 | other | downstream | 1468890 | 63302491 ~ 63334694 (+) | True | LOC100305204 |
| TU1247501 | other | downstream | 2054495 | 63888096 ~ 63890557 (+) | False | LOC110538933 |
| TU1247690 | other | downstream | 2302757 | 64136358 ~ 64136704 (+) | True | G1097063 |
| TU1247743 | other | downstream | 2394400 | 64228001 ~ 64228684 (+) | True | G1097116 |
